STRINGSTRING
BN2166_0023860 BN2166_0023860 BN2166_0024530 BN2166_0024530 BN2166_0024960 BN2166_0024960 BN2166_0025630 BN2166_0025630 BN2166_0037000 BN2166_0037000 BN2166_0011620 BN2166_0011620 BN2166_0026560 BN2166_0026560 BN2166_0028310 BN2166_0028310 BN2166_0054920 BN2166_0054920 BN2166_0035330 BN2166_0035330 BN2166_0059900 BN2166_0059900 BN2166_0003150 BN2166_0003150 BN2166_0006750 BN2166_0006750 BN2166_0008900 BN2166_0008900 BN2166_0009200 BN2166_0009200 BN2166_0073870 BN2166_0073870 BN2166_0066420 BN2166_0066420 BN2166_0061770 BN2166_0061770 BN2166_0073810 BN2166_0073810 BN2166_0059920 BN2166_0059920 BN2166_0058520 BN2166_0058520 BN2166_0073480 BN2166_0073480 BN2166_0061530 BN2166_0061530 BN2166_0061730 BN2166_0061730 BN2166_0071700 BN2166_0071700 BN2166_0063180 BN2166_0063180 BN2166_0061710 BN2166_0061710 BN2166_0069290 BN2166_0069290 BN2166_0065060 BN2166_0065060 BN2166_0070740 BN2166_0070740 BN2166_0073090 BN2166_0073090 BN2166_0070730 BN2166_0070730 BN2166_0000430 BN2166_0000430 BN2166_0000630 BN2166_0000630 BN2166_0002940 BN2166_0002940 BN2166_0006690 BN2166_0006690 BN2166_0007660 BN2166_0007660 BN2166_0047940 BN2166_0047940 BN2166_0047840 BN2166_0047840 BN2166_0043010 BN2166_0043010 BN2166_0025670 BN2166_0025670 BN2166_0039530 BN2166_0039530 BN2166_0041490 BN2166_0041490 BN2166_0023420 BN2166_0023420 BN2166_0047850 BN2166_0047850 BN2166_0034130 BN2166_0034130 BN2166_0033070 BN2166_0033070 BN2166_0033630 BN2166_0033630 BN2166_0050580 BN2166_0050580 BN2166_0049260 BN2166_0049260 BN2166_0051380 BN2166_0051380 BN2166_0064850 BN2166_0064850 BN2166_0065600 BN2166_0065600 BN2166_0053610 BN2166_0053610 BN2166_0059890 BN2166_0059890 BN2166_0036990 BN2166_0036990 BN2166_0060330 BN2166_0060330 BN2166_0036940 BN2166_0036940 BN2166_0032310 BN2166_0032310 BN2166_0018820 BN2166_0018820 BN2166_0017820 BN2166_0017820 BN2166_0030460 BN2166_0030460 BN2166_0000620 BN2166_0000620 BN2166_0015980 BN2166_0015980 BN2166_0029200 BN2166_0029200 BN2166_0019410 BN2166_0019410 BN2166_0020410 BN2166_0020410 BN2166_0006570 BN2166_0006570 BN2166_0033550 BN2166_0033550 BN2166_0025640 BN2166_0025640
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0023860annotation not available (369 aa)
BN2166_0024530P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the AAA ATPase family. (462 aa)
BN2166_0024960Uncharacterized protein. (735 aa)
BN2166_0025630BY PROTMAP: gi|342320858|gb|EGU12796.1| Proteasome 26S subunit [Rhodotorula glutinis ATCC 204091]. (294 aa)
BN2166_0037000Uncharacterized protein. (152 aa)
BN2166_0011620Proteasome subunit beta; Belongs to the peptidase T1B family. (275 aa)
BN2166_0026560annotation not available (465 aa)
BN2166_0028310Proteasome subunit alpha type. (248 aa)
BN2166_0054920FGENESH: predicted gene_10.329 protein. (155 aa)
BN2166_0035330Proteasome subunit beta. (229 aa)
BN2166_0059900Proteasome subunit alpha type. (244 aa)
BN2166_0003150Proteasome subunit alpha type. (267 aa)
BN2166_0006750FGENESH: predicted gene_1.675 protein. (292 aa)
BN2166_0008900XPC-binding domain-domain containing protein. (403 aa)
BN2166_0009200annotation not available (600 aa)
BN2166_0073870Putative proteolysis and peptidolysis-related protein. (259 aa)
BN2166_0066420annotation not available (436 aa)
BN2166_0061770annotation not available (1108 aa)
BN2166_0073810annotation not available (547 aa)
BN2166_0059920annotation not available (255 aa)
BN2166_0058520BY PROTMAP: gi|342320591|gb|EGU12531.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (949 aa)
BN2166_0073480annotation not available (846 aa)
BN2166_0061530Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (312 aa)
BN2166_0061730PCI domain-containing protein. (264 aa)
BN2166_007170026S proteasome subunit RPN7-domain containing protein. (508 aa)
BN2166_0063180Ubiquitin carboxyl-terminal hydrolase. (533 aa)
BN2166_0061710annotation not available (389 aa)
BN2166_0069290Multidrug resistance protein. (269 aa)
BN2166_0065060Proteasome complex subunit Rpn13 ubiquitin receptor-domain containing protein. (320 aa)
BN2166_0070740BY PROTMAP: gi|357620831|gb|EHJ72875.1| 26S protease regulatory subunit [Danaus plexippus]; Belongs to the AAA ATPase family. (334 aa)
BN2166_0073090FGENESH: predicted gene_17.167 protein. (1943 aa)
BN2166_0070730FGENESH: predicted gene_16.99 protein. (810 aa)
BN2166_0000430Uncharacterized protein. (922 aa)
BN2166_0000630VWFA domain-containing protein. (401 aa)
BN2166_0002940annotation not available (115 aa)
BN2166_0006690FGENESH: predicted gene_1.669 protein. (340 aa)
BN2166_0007660Uncharacterized protein. (768 aa)
BN2166_0047940BY PROTMAP: gi|342321379|gb|EGU13313.1| ATPase [Rhodotorula glutinis ATCC 204091]. (1497 aa)
BN2166_0047840BY PROTMAP: gi|342319959|gb|EGU11904.1| Proteasome 26S subunit [Rhodotorula glutinis ATCC 204091]. (394 aa)
BN2166_004301026S proteasome non-ATPase regulatory subunit 1. (210 aa)
BN2166_0025670FGENESH: predicted gene_5.112 protein. (90 aa)
BN2166_0039530ATP-dependent 26S proteasome regulatory subunit; Belongs to the AAA ATPase family. (403 aa)
BN2166_0041490Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family. (179 aa)
BN2166_0023420Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (284 aa)
BN2166_0047850BY PROTMAP: gi|647401714|emb|CDR48069.1| RHTO0S16e00606g1_1 [Rhodosporidium toruloides]. (422 aa)
BN2166_0034130FGENESH: predicted gene_6.335 protein. (66 aa)
BN2166_0033070annotation not available (266 aa)
BN2166_0033630PAC2 family-domain containing protein. (297 aa)
BN2166_0050580Proteasome subunit beta. (296 aa)
BN2166_0049260BY PROTMAP: gi|647396700|emb|CDR39139.1| RHTO0S04e02146g1_1 [Rhodosporidium toruloides]. (398 aa)
BN2166_0051380Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (319 aa)
BN2166_0064850annotation not available (289 aa)
BN2166_0065600annotation not available (392 aa)
BN2166_005361026S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (940 aa)
BN2166_0059890FGENESH: predicted gene_12.149 protein. (260 aa)
BN2166_0036990AAA domain-containing protein; Belongs to the AAA ATPase family. (284 aa)
BN2166_0060330BY PROTMAP: gi|761930019|gb|KIY50995.1| 26S proteasome subunit P45 [Fistulina hepatica ATCC 64428]; Belongs to the AAA ATPase family. (413 aa)
BN2166_003694026S protease-like protein regulatory subunit. (72 aa)
BN2166_0032310Ubiquitin carboxyl-terminal hydrolase. (328 aa)
BN2166_0018820Proteasome subunit beta. (201 aa)
BN2166_001782026S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (1035 aa)
BN2166_0030460BY PROTMAP: gi|342321067|gb|EGU13005.1| putative Hst3 protein [Rhodotorula glutinis ATCC 204091]. (509 aa)
BN2166_0000620BY PROTMAP: gi|342320614|gb|EGU12553.1| Translation repressor [Rhodotorula glutinis ATCC 204091]. (1271 aa)
BN2166_0015980BY PROTMAP: gi|342319127|gb|EGU11078.1| Hst3 protein [Rhodotorula glutinis ATCC 204091]. (711 aa)
BN2166_0029200Proteasome subunit alpha type. (256 aa)
BN2166_0019410BY PROTMAP: gi|342320107|gb|EGU12050.1| Endopeptidase [Rhodotorula glutinis ATCC 204091]; Belongs to the AAA ATPase family. (409 aa)
BN2166_0020410annotation not available (251 aa)
BN2166_0006570FGENESH: predicted gene_1.657 protein. (161 aa)
BN2166_0033550Thyroid receptor-interacting protein 13. (552 aa)
BN2166_0025640Proteasome subunit beta. (225 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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