STRINGSTRING
BN2166_0017610 BN2166_0017610 BN2166_0075320 BN2166_0075320 BN2166_0075020 BN2166_0075020 BN2166_0074820 BN2166_0074820 BN2166_0075110 BN2166_0075110 BN2166_0074810 BN2166_0074810 BN2166_0072510 BN2166_0072510 BN2166_0070030 BN2166_0070030 BN2166_0070000 BN2166_0070000 BN2166_0066300 BN2166_0066300 BN2166_0052430 BN2166_0052430 BN2166_0061100 BN2166_0061100 BN2166_0047260 BN2166_0047260 BN2166_0052450 BN2166_0052450 BN2166_0024380 BN2166_0024380 BN2166_0022210 BN2166_0022210 BN2166_0024390 BN2166_0024390 BN2166_0020680 BN2166_0020680 BN2166_0010080 BN2166_0010080 BN2166_0008540 BN2166_0008540
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0017610FGENESH: predicted gene_3.212 protein. (1777 aa)
BN2166_0075320FGENESH: predicted gene_29.1 protein. (1456 aa)
BN2166_0075020FGENESH: predicted gene_24.1 protein. (390 aa)
BN2166_0074820FGENESH: predicted gene_20.5 protein. (1374 aa)
BN2166_0075110FGENESH: predicted gene_25.1 protein. (987 aa)
BN2166_0074810FGENESH: predicted gene_20.4 protein. (781 aa)
BN2166_0072510FGENESH: predicted gene_17.109 protein. (1594 aa)
BN2166_0070030annotation not available (1384 aa)
BN2166_0070000SacI homology domain-domain containing protein. (658 aa)
BN2166_0066300annotation not available (1334 aa)
BN2166_0052430FGENESH: predicted gene_10.80 protein. (1510 aa)
BN2166_0061100BY PROTMAP: gi|814543146|emb|CEQ39523.1| SPOSA6832_01050 [Sporidiobolus salmonicolor]. (389 aa)
BN2166_0047260FGENESH: predicted gene_9.72 protein. (1762 aa)
BN2166_0052450FGENESH: predicted gene_10.82 protein. (887 aa)
BN2166_0024380FGENESH: predicted gene_4.214 protein. (2249 aa)
BN2166_0022210FGENESH: predicted gene_3.672 protein. (781 aa)
BN2166_0024390FGENESH: predicted gene_4.215 protein. (2233 aa)
BN2166_0020680FGENESH: predicted gene_3.519 protein. (1459 aa)
BN2166_0010080Uncharacterized protein. (459 aa)
BN2166_0008540FGENESH: predicted gene_2.23 protein. (1833 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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