STRINGSTRING
BN2166_0056830 BN2166_0056830 BN2166_0004800 BN2166_0004800 BN2166_0025850 BN2166_0025850 BN2166_0015930 BN2166_0015930 BN2166_0004370 BN2166_0004370 BN2166_0030500 BN2166_0030500 BN2166_0010620 BN2166_0010620 BN2166_0025760 BN2166_0025760 BN2166_0041480 BN2166_0041480 BN2166_0047690 BN2166_0047690 BN2166_0051040 BN2166_0051040 BN2166_0058490 BN2166_0058490 BN2166_0048370 BN2166_0048370
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0056830annotation not available (787 aa)
BN2166_0004800annotation not available (416 aa)
BN2166_0025850BY PROTMAP: gi|814539488|emb|CEQ43147.1| SPOSA6832_05049, partial [Sporidiobolus salmonicolor]. (1045 aa)
BN2166_0015930Armadillo-type fold. (807 aa)
BN2166_0004370annotation not available (554 aa)
BN2166_0030500BY PROTMAP: gi|342321069|gb|EGU13007.1| Cytoplasmic protein [Rhodotorula glutinis ATCC 204091]. (643 aa)
BN2166_0010620Ribosome biogenesis protein Noc4. (647 aa)
BN2166_002576020S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (504 aa)
BN2166_0041480Nucleolar protein,Nop52-domain containing protein. (375 aa)
BN2166_0047690Bystin-domain containing protein. (438 aa)
BN2166_0051040annotation not available (313 aa)
BN2166_0058490annotation not available (1957 aa)
BN2166_0048370DRIM domain-containing protein. (2568 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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