STRINGSTRING
BN2166_0030710 BN2166_0030710 BN2166_0059940 BN2166_0059940 BN2166_0054330 BN2166_0054330 BN2166_0047980 BN2166_0047980 BN2166_0040580 BN2166_0040580 BN2166_0034560 BN2166_0034560 BN2166_0034280 BN2166_0034280 BN2166_0044470 BN2166_0044470 BN2166_0005690 BN2166_0005690 BN2166_0006180 BN2166_0006180 BN2166_0031200 BN2166_0031200 BN2166_0025780 BN2166_0025780 BN2166_0031490 BN2166_0031490 BN2166_0069960 BN2166_0069960
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0030710Protein-tyrosine phosphatase-like protein. (823 aa)
BN2166_0059940annotation not available (229 aa)
BN2166_0054330BY PROTMAP: gi|647394322|emb|CDR35551.1| RHTO0S01e01838g1_1 [Rhodosporidium toruloides]. (534 aa)
BN2166_0047980FGENESH: predicted gene_9.144 protein. (677 aa)
BN2166_0040580Tyrosine phosphatase family-domain containing protein. (202 aa)
BN2166_0034560Uncharacterized protein. (533 aa)
BN2166_0034280annotation not available (904 aa)
BN2166_0044470Uncharacterized protein. (322 aa)
BN2166_0005690Protein-tyrosine phosphatase-like protein. (396 aa)
BN2166_0006180BY PROTMAP: gi|342320697|gb|EGU12636.1| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091]. (970 aa)
BN2166_0031200BY PROTMAP: gi|647403364|emb|CDR49492.1| RHTO0S27e00804g2_1 [Rhodosporidium toruloides]. (1109 aa)
BN2166_0025780annotation not available (482 aa)
BN2166_0031490BY PROTMAP: gi|342319595|gb|EGU11542.1| PTPc [Rhodotorula glutinis ATCC 204091]. (647 aa)
BN2166_0069960annotation not available (1474 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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