46 items (Rhodotorula toruloides) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BN2166_0011620	Proteasome subunit beta; Belongs to the peptidase T1B family. (275 aa)
	BN2166_0026560	annotation not available (465 aa)
	BN2166_0039530	ATP-dependent 26S proteasome regulatory subunit; Belongs to the AAA ATPase family. (403 aa)
	BN2166_0025670	FGENESH: predicted gene_5.112 protein. (90 aa)
	BN2166_0043010	26S proteasome non-ATPase regulatory subunit 1. (210 aa)
	BN2166_0047840	BY PROTMAP: gi\|342319959\|gb\|EGU11904.1\| Proteasome 26S subunit [Rhodotorula glutinis ATCC 204091]. (394 aa)
	BN2166_0031670	BY PROTMAP: gi\|342319608\|gb\|EGU11555.1\| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (694 aa)
	BN2166_0033070	annotation not available (266 aa)
	BN2166_0050580	Proteasome subunit beta. (296 aa)
	BN2166_0051380	Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (319 aa)
	BN2166_0064850	annotation not available (289 aa)
	BN2166_0065600	annotation not available (392 aa)
	BN2166_0053610	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (940 aa)
	BN2166_0060330	BY PROTMAP: gi\|761930019\|gb\|KIY50995.1\| 26S proteasome subunit P45 [Fistulina hepatica ATCC 64428]; Belongs to the AAA ATPase family. (413 aa)
	BN2166_0061530	Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (312 aa)
	BN2166_0061730	PCI domain-containing protein. (264 aa)
	BN2166_0061710	annotation not available (389 aa)
	BN2166_0069290	Multidrug resistance protein. (269 aa)
	BN2166_0070740	BY PROTMAP: gi\|357620831\|gb\|EHJ72875.1\| 26S protease regulatory subunit [Danaus plexippus]; Belongs to the AAA ATPase family. (334 aa)
	BN2166_0073090	FGENESH: predicted gene_17.167 protein. (1943 aa)
	BN2166_0070730	FGENESH: predicted gene_16.99 protein. (810 aa)
	BN2166_0073810	annotation not available (547 aa)
	BN2166_0017820	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (1035 aa)
	BN2166_0035330	Proteasome subunit beta. (229 aa)
	BN2166_0059900	Proteasome subunit alpha type. (244 aa)
	BN2166_0003150	Proteasome subunit alpha type. (267 aa)
	BN2166_0006750	FGENESH: predicted gene_1.675 protein. (292 aa)
	BN2166_0000630	VWFA domain-containing protein. (401 aa)
	BN2166_0006690	FGENESH: predicted gene_1.669 protein. (340 aa)
	BN2166_0021000	Protein transporter SEC61 subunit alpha, variant; Belongs to the SecY/SEC61-alpha family. (475 aa)
	BN2166_0023420	Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (284 aa)
	BN2166_0047850	BY PROTMAP: gi\|647401714\|emb\|CDR48069.1\| RHTO0S16e00606g1_1 [Rhodosporidium toruloides]. (422 aa)
	BN2166_0036990	AAA domain-containing protein; Belongs to the AAA ATPase family. (284 aa)
	BN2166_0036940	26S protease-like protein regulatory subunit. (72 aa)
	BN2166_0018820	Proteasome subunit beta. (201 aa)
	BN2166_0029200	Proteasome subunit alpha type. (256 aa)
	BN2166_0028310	Proteasome subunit alpha type. (248 aa)
	BN2166_0019410	BY PROTMAP: gi\|342320107\|gb\|EGU12050.1\| Endopeptidase [Rhodotorula glutinis ATCC 204091]; Belongs to the AAA ATPase family. (409 aa)
	BN2166_0020410	annotation not available (251 aa)
	BN2166_0006570	FGENESH: predicted gene_1.657 protein. (161 aa)
	BN2166_0025640	Proteasome subunit beta. (225 aa)
	BN2166_0023860	annotation not available (369 aa)
	BN2166_0024530	P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the AAA ATPase family. (462 aa)
	BN2166_0024960	Uncharacterized protein. (735 aa)
	BN2166_0025630	BY PROTMAP: gi\|342320858\|gb\|EGU12796.1\| Proteasome 26S subunit [Rhodotorula glutinis ATCC 204091]. (294 aa)
	BN2166_0037000	Uncharacterized protein. (152 aa)

Your Current Organism:

Rhodotorula toruloides

NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN2166_0000630	BN2166_0003150	A0A0K3C6D2	A0A0K3C4D1	VWFA domain-containing protein.	Proteasome subunit alpha type.	0.997
BN2166_0000630	BN2166_0006570	A0A0K3C6D2	A0A0K3CCD3	VWFA domain-containing protein.	FGENESH: predicted gene_1.657 protein.	0.959
BN2166_0000630	BN2166_0006690	A0A0K3C6D2	A0A0K3C7L3	VWFA domain-containing protein.	FGENESH: predicted gene_1.669 protein.	0.959
BN2166_0000630	BN2166_0006750	A0A0K3C6D2	A0A0K3C590	VWFA domain-containing protein.	FGENESH: predicted gene_1.675 protein.	0.959
BN2166_0000630	BN2166_0011620	A0A0K3C6D2	A0A0K3CDR9	VWFA domain-containing protein.	Proteasome subunit beta; Belongs to the peptidase T1B family.	0.998
BN2166_0000630	BN2166_0017820	A0A0K3C6D2	A0A0K3CFE6	VWFA domain-containing protein.	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.987
BN2166_0000630	BN2166_0018820	A0A0K3C6D2	A0A0K3CFN9	VWFA domain-containing protein.	Proteasome subunit beta.	0.998
BN2166_0000630	BN2166_0019410	A0A0K3C6D2	A0A0K3CC06	VWFA domain-containing protein.	BY PROTMAP: gi\|342320107\|gb\|EGU12050.1\| Endopeptidase [Rhodotorula glutinis ATCC 204091]; Belongs to the AAA ATPase family.	0.999
BN2166_0000630	BN2166_0020410	A0A0K3C6D2	A0A0K3CCA0	VWFA domain-containing protein.	annotation not available	0.902
BN2166_0000630	BN2166_0023420	A0A0K3C6D2	A0A0K3CH20	VWFA domain-containing protein.	Proteasome endopeptidase complex; Belongs to the peptidase T1A family.	0.998
BN2166_0000630	BN2166_0023860	A0A0K3C6D2	A0A0K3CDA3	VWFA domain-containing protein.	annotation not available	0.999
BN2166_0000630	BN2166_0024530	A0A0K3C6D2	A0A0K3CDD1	VWFA domain-containing protein.	P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the AAA ATPase family.	0.999
BN2166_0000630	BN2166_0024960	A0A0K3C6D2	A0A0K3CDK6	VWFA domain-containing protein.	Uncharacterized protein.	0.982
BN2166_0000630	BN2166_0025630	A0A0K3C6D2	A0A0K3CDM6	VWFA domain-containing protein.	BY PROTMAP: gi\|342320858\|gb\|EGU12796.1\| Proteasome 26S subunit [Rhodotorula glutinis ATCC 204091].	0.999
BN2166_0000630	BN2166_0025640	A0A0K3C6D2	A0A0K3CCR2	VWFA domain-containing protein.	Proteasome subunit beta.	0.987
BN2166_0000630	BN2166_0025670	A0A0K3C6D2	A0A0K3CHL6	VWFA domain-containing protein.	FGENESH: predicted gene_5.112 protein.	0.987
BN2166_0000630	BN2166_0026560	A0A0K3C6D2	A0A0K3CE45	VWFA domain-containing protein.	annotation not available	0.999
BN2166_0000630	BN2166_0028310	A0A0K3C6D2	A0A0K3CEJ6	VWFA domain-containing protein.	Proteasome subunit alpha type.	0.996
BN2166_0000630	BN2166_0029200	A0A0K3C6D2	A0A0K3CBC6	VWFA domain-containing protein.	Proteasome subunit alpha type.	0.997
BN2166_0000630	BN2166_0031670	A0A0K3C6D2	A0A0K3CJE9	VWFA domain-containing protein.	BY PROTMAP: gi\|342319608\|gb\|EGU11555.1\| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091].	0.990

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