STRINGSTRING
BN2166_0044350 BN2166_0044350 BN2166_0054080 BN2166_0054080 BN2166_0002700 BN2166_0002700 A0A0K3C5N9 A0A0K3C5N9 BN2166_0001640 BN2166_0001640 BN2166_0010950 BN2166_0010950 BN2166_0003390 BN2166_0003390 BN2166_0004490 BN2166_0004490 BN2166_0003030 BN2166_0003030 BN2166_0005040 BN2166_0005040 BN2166_0004930 BN2166_0004930 BN2166_0005710 BN2166_0005710 BN2166_0018250 BN2166_0018250 BN2166_0019350 BN2166_0019350 BN2166_0017480 BN2166_0017480 BN2166_0029150 BN2166_0029150 BN2166_0017010 BN2166_0017010 BN2166_0022090 BN2166_0022090 BN2166_0005720 BN2166_0005720 BN2166_0020610 BN2166_0020610 BN2166_0033750 BN2166_0033750 BN2166_0008270 BN2166_0008270 BN2166_0022580 BN2166_0022580 BN2166_0014670 BN2166_0014670 BN2166_0040550 BN2166_0040550 BN2166_0031130 BN2166_0031130 BN2166_0034990 BN2166_0034990 BN2166_0031260 BN2166_0031260 BN2166_0018170 BN2166_0018170 BN2166_0018570 BN2166_0018570 BN2166_0034280 BN2166_0034280 BN2166_0020570 BN2166_0020570 BN2166_0045950 BN2166_0045950 BN2166_0036130 BN2166_0036130 BN2166_0022170 BN2166_0022170 BN2166_0022220 BN2166_0022220 BN2166_0041640 BN2166_0041640 BN2166_0042890 BN2166_0042890 BN2166_0029020 BN2166_0029020 BN2166_0042310 BN2166_0042310 BN2166_0057200 BN2166_0057200 BN2166_0059000 BN2166_0059000 BN2166_0059150 BN2166_0059150 BN2166_0035020 BN2166_0035020 BN2166_0035670 BN2166_0035670 BN2166_0051010 BN2166_0051010 BN2166_0051260 BN2166_0051260 BN2166_0058990 BN2166_0058990 BN2166_0043070 BN2166_0043070 MDM34 MDM34 BN2166_0057110 BN2166_0057110 BN2166_0064680 BN2166_0064680 BN2166_0050520 BN2166_0050520 BN2166_0051620 BN2166_0051620 BN2166_0064860 BN2166_0064860 BN2166_0056870 BN2166_0056870 BN2166_0057470 BN2166_0057470 BN2166_0059120 BN2166_0059120 BN2166_0075030 BN2166_0075030 BN2166_0069570 BN2166_0069570 BN2166_0074670 BN2166_0074670 BN2166_0074800 BN2166_0074800
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0044350Snf7-domain containing protein. (220 aa)
BN2166_0054080Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
BN2166_0002700BY PROTMAP: gi|342319356|gb|EGU11305.1| polyketide synthase [Rhodotorula glutinis ATCC 204091]. (471 aa)
A0A0K3C5N9annotation not available (799 aa)
BN2166_0001640USP domain-containing protein; Belongs to the peptidase C19 family. (640 aa)
BN2166_0010950Uncharacterized protein. (220 aa)
BN2166_0003390annotation not available (153 aa)
BN2166_0004490FGENESH: predicted gene_1.449 protein. (187 aa)
BN2166_0003030Phosphatidylinositol 3-kinase VPS34. (894 aa)
BN2166_0005040Uncharacterized protein. (150 aa)
BN2166_0004930Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (173 aa)
BN2166_0005710BY PROTMAP: gi|814540439|emb|CEQ42196.1| SPOSA6832_04001, partial [Sporidiobolus salmonicolor]. (746 aa)
BN2166_0018250Snf7-domain containing protein. (218 aa)
BN2166_0019350Snf7-domain containing protein. (246 aa)
BN2166_0017480Autophagy-related protein 3. (332 aa)
BN2166_0029150Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy. (134 aa)
BN2166_0017010annotation not available (1034 aa)
BN2166_0022090BY PROTMAP: gi|342321655|gb|EGU13587.1| Cysteine protease ATG4 [Rhodotorula glutinis ATCC 204091]. (1119 aa)
BN2166_0005720FGENESH: predicted gene_1.572 protein. (841 aa)
BN2166_0020610annotation not available (394 aa)
BN2166_0033750FGENESH: predicted gene_6.297 protein. (977 aa)
BN2166_0008270annotation not available (138 aa)
BN2166_0022580Autophagy-related protein. (109 aa)
BN2166_0014670annotation not available (652 aa)
BN2166_0040550Uncharacterized protein. (444 aa)
BN2166_0031130Uncharacterized protein. (294 aa)
BN2166_0034990FGENESH: predicted gene_6.421 protein. (910 aa)
BN2166_0031260Autophagy-related protein 16. (235 aa)
BN2166_0018170ATG11 domain-containing protein. (1462 aa)
BN2166_0018570Uncharacterized protein. (230 aa)
BN2166_0034280annotation not available (904 aa)
BN2166_0020570Serine/threonine-protein kinase ATG1. (1062 aa)
BN2166_0045950Serine/threonine-protein kinase Tel1; Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR), ultraviolet light (UV), or DNA replication stalling, thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates histone H2A to form H2AS128ph (gamma-H2A) at sites of DNA damage, involved in the regulation of DNA damage response mechanism. Required for the control of telomere length and genome stability; Belongs to the PI3/PI4-kinase family. ATM subfamily. (3051 aa)
BN2166_0036130annotation not available (453 aa)
BN2166_0022170annotation not available (891 aa)
BN2166_0022220Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. (316 aa)
BN2166_0041640annotation not available (327 aa)
BN2166_0042890Uncharacterized protein. (218 aa)
BN2166_0029020Ubiquitin-related domain-containing protein. (154 aa)
BN2166_0042310FGENESH: predicted gene_8.86 protein. (1243 aa)
BN2166_0057200Uncharacterized protein. (269 aa)
BN2166_0059000Belongs to the protein kinase superfamily. (365 aa)
BN2166_0059150Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. (436 aa)
BN2166_0035020Outer membrane protein. (376 aa)
BN2166_0035670Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily. (1175 aa)
BN2166_0051010Non-specific serine/threonine protein kinase. (862 aa)
BN2166_0051260Non-specific serine/threonine protein kinase. (1627 aa)
BN2166_0058990FUN14 family-domain containing protein. (227 aa)
BN2166_0043070Uncharacterized protein. (888 aa)
MDM34Mitochondrial distribution and morphology protein 34; Component of the ERMES/MDM complex, which serves as a molecular tether to connect the endoplasmic reticulum (ER) and mitochondria. Components of this complex are involved in the control of mitochondrial shape and protein biogenesis, and function in nonvesicular lipid trafficking between the ER and mitochondria. MDM34 is required for the interaction of the ER-resident membrane protein MMM1 and the outer mitochondrial membrane-resident beta-barrel protein MDM10. (794 aa)
BN2166_0057110Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (439 aa)
BN2166_0064680FGENESH: predicted gene_14.18 protein. (120 aa)
BN2166_0050520FGENESH: predicted gene_9.398 protein. (555 aa)
BN2166_0051620BY PROTMAP: gi|342321232|gb|EGU13166.1| ADP/ATP carrier receptor [Rhodotorula glutinis ATCC 204091]. (837 aa)
BN2166_0064860Protein kinase domain-containing protein. (2174 aa)
BN2166_0056870Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (951 aa)
BN2166_0057470Peroxisomal targeting signal receptor. (694 aa)
BN2166_0059120Belongs to the protein kinase superfamily. (348 aa)
BN2166_0075030Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. (317 aa)
BN2166_0069570Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (853 aa)
BN2166_0074670Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 and ATG8 for its conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Autophagy is essential for maintenance of amino acid levels and protein synthesis under nitrogen starvation. Required for selective autophagic degradation of the nucleus (nucleophagy) as well as for mitophagy wh [...] (691 aa)
BN2166_0074800Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. (316 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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