31 items (Rhodotorula toruloides) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BN2166_0040580	Tyrosine phosphatase family-domain containing protein. (202 aa)
	BN2166_0006030	Serine/threonine-protein phosphatase. (306 aa)
	BN2166_0009700	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (439 aa)
	BN2166_0003390	annotation not available (153 aa)
	BN2166_0012400	BY PROTMAP: gi\|647394720\|emb\|CDR35954.1\| RHTO0S01e10902g1_1 [Rhodosporidium toruloides]. (316 aa)
	BN2166_0005040	Uncharacterized protein. (150 aa)
	BN2166_0009760	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (347 aa)
	BN2166_0011930	BY PROTMAP: gi\|647394773\|emb\|CDR36007.1\| RHTO0S01e12134g1_1 [Rhodosporidium toruloides]. (607 aa)
	BN2166_0025780	annotation not available (482 aa)
	BN2166_0034040	annotation not available (542 aa)
	BN2166_0018570	Uncharacterized protein. (230 aa)
	BN2166_0019520	Ribosomal protein subunit Mrp10. (137 aa)
	BN2166_0034560	Uncharacterized protein. (533 aa)
	BN2166_0035760	Protein kinase domain-containing protein. (345 aa)
	BN2166_0035960	annotation not available (644 aa)
	BN2166_0029020	Ubiquitin-related domain-containing protein. (154 aa)
	BN2166_0042310	FGENESH: predicted gene_8.86 protein. (1243 aa)
	BN2166_0031120	BY PROTMAP: gi\|342319574\|gb\|EGU11521.1\| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (600 aa)
	BN2166_0031270	BY PROTMAP: gi\|342319582\|gb\|EGU11529.1\| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (606 aa)
	BN2166_0032320	Uncharacterized protein. (156 aa)
	BN2166_0047980	FGENESH: predicted gene_9.144 protein. (677 aa)
	BN2166_0060300	annotation not available (803 aa)
	BN2166_0035770	FGENESH: predicted gene_6.499 protein. (94 aa)
	BN2166_0062150	annotation not available (376 aa)
	BN2166_0057490	annotation not available (416 aa)
	BN2166_0059940	annotation not available (229 aa)
	BN2166_0062930	Stretch-activated Ca2+-permeable channel component-domain containing protein. (609 aa)
	BN2166_0062980	Mitogen-activated protein kinase. (344 aa)
	BN2166_0066340	Protein kinase-like domain-containing protein. (511 aa)
	BN2166_0062010	FGENESH: predicted gene_13.31 protein. (345 aa)
	BN2166_0069410	FGENESH: predicted gene_15.222 protein. (950 aa)

Your Current Organism:

Rhodotorula toruloides

NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN2166_0003390	BN2166_0006030	A0A0K3C6J0	A0A061AM61	annotation not available	Serine/threonine-protein phosphatase.	0.658
BN2166_0003390	BN2166_0009700	A0A0K3C6J0	A0A0K3C5Y7	annotation not available	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.418
BN2166_0003390	BN2166_0009760	A0A0K3C6J0	A0A0K3C9B7	annotation not available	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.418
BN2166_0003390	BN2166_0011930	A0A0K3C6J0	A0A0K3C9M3	annotation not available	BY PROTMAP: gi\|647394773\|emb\|CDR36007.1\| RHTO0S01e12134g1_1 [Rhodosporidium toruloides].	0.638
BN2166_0003390	BN2166_0018570	A0A0K3C6J0	A0A0K3CFL1	annotation not available	Uncharacterized protein.	0.982
BN2166_0003390	BN2166_0029020	A0A0K3C6J0	A0A0K3CII4	annotation not available	Ubiquitin-related domain-containing protein.	0.938
BN2166_0003390	BN2166_0035760	A0A0K3C6J0	A0A0K3CGP1	annotation not available	Protein kinase domain-containing protein.	0.418
BN2166_0003390	BN2166_0035770	A0A0K3C6J0	A0A0K3CKH8	annotation not available	FGENESH: predicted gene_6.499 protein.	0.418
BN2166_0003390	BN2166_0042310	A0A0K3C6J0	A0A0K3CIR4	annotation not available	FGENESH: predicted gene_8.86 protein.	0.937
BN2166_0003390	BN2166_0062930	A0A0K3C6J0	A0A0K3CP14	annotation not available	Stretch-activated Ca2+-permeable channel component-domain containing protein.	0.418
BN2166_0003390	BN2166_0062980	A0A0K3C6J0	A0A0K3CP19	annotation not available	Mitogen-activated protein kinase.	0.418
BN2166_0003390	BN2166_0069410	A0A0K3C6J0	A0A0K3CRG0	annotation not available	FGENESH: predicted gene_15.222 protein.	0.584
BN2166_0005040	BN2166_0006030	A0A0K3C739	A0A061AM61	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.584
BN2166_0005040	BN2166_0009700	A0A0K3C739	A0A0K3C5Y7	Uncharacterized protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.418
BN2166_0005040	BN2166_0009760	A0A0K3C739	A0A0K3C9B7	Uncharacterized protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.418
BN2166_0005040	BN2166_0011930	A0A0K3C739	A0A0K3C9M3	Uncharacterized protein.	BY PROTMAP: gi\|647394773\|emb\|CDR36007.1\| RHTO0S01e12134g1_1 [Rhodosporidium toruloides].	0.621
BN2166_0005040	BN2166_0018570	A0A0K3C739	A0A0K3CFL1	Uncharacterized protein.	Uncharacterized protein.	0.773
BN2166_0005040	BN2166_0029020	A0A0K3C739	A0A0K3CII4	Uncharacterized protein.	Ubiquitin-related domain-containing protein.	0.773
BN2166_0005040	BN2166_0035760	A0A0K3C739	A0A0K3CGP1	Uncharacterized protein.	Protein kinase domain-containing protein.	0.418
BN2166_0005040	BN2166_0035770	A0A0K3C739	A0A0K3CKH8	Uncharacterized protein.	FGENESH: predicted gene_6.499 protein.	0.418

page 1 of 18

Server load: low (18%) [HD]

Permalink

Network

Fusion

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Neighborhood

© STRING Consortium 2025

Credits

Access

Info

About