STRINGSTRING
BN2166_0062930 BN2166_0062930 BN2166_0015520 BN2166_0015520 BN2166_0004910 BN2166_0004910 BN2166_0015580 BN2166_0015580 BN2166_0028060 BN2166_0028060 BN2166_0034040 BN2166_0034040 BN2166_0016820 BN2166_0016820 BN2166_0018920 BN2166_0018920 BN2166_0035960 BN2166_0035960 BN2166_0031870 BN2166_0031870 BN2166_0059090 BN2166_0059090 BN2166_0065340 BN2166_0065340 BN2166_0001980 BN2166_0001980 BN2166_0062980 BN2166_0062980 BN2166_0066340 BN2166_0066340
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0062930Stretch-activated Ca2+-permeable channel component-domain containing protein. (609 aa)
BN2166_0015520RHTO0S11e00144g1_1. (109 aa)
BN2166_0004910Thioredoxin; Belongs to the thioredoxin family. (108 aa)
BN2166_0015580Thioredoxin. (109 aa)
BN2166_0028060annotation not available (472 aa)
BN2166_0034040annotation not available (542 aa)
BN2166_0016820Thioredoxin-like fold. (241 aa)
BN2166_0018920annotation not available (915 aa)
BN2166_0035960annotation not available (644 aa)
BN2166_0031870annotation not available (2193 aa)
BN2166_0059090Uncharacterized protein. (406 aa)
BN2166_0065340BY PROTMAP: gi|472585593|gb|EMS23144.1| thioredoxin [Rhodosporidium toruloides NP11]. (103 aa)
BN2166_0001980SGS domain-domain containing protein. (211 aa)
BN2166_0062980Mitogen-activated protein kinase. (344 aa)
BN2166_0066340Protein kinase-like domain-containing protein. (511 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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