24 items (Rhodotorula toruloides) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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Predicted Interactions

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Your Input:
	BN2166_0050110	Uncharacterized protein; Belongs to the peptidase S8 family. (672 aa)
	BN2166_0034270	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (732 aa)
	BN2166_0042310	FGENESH: predicted gene_8.86 protein. (1243 aa)
	BN2166_0029020	Ubiquitin-related domain-containing protein. (154 aa)
	BN2166_0026320	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1662 aa)
	BN2166_0050850	Sterol-sensing domain of SREBP cleavage-activation-domain containing protein. (1548 aa)
	BN2166_0038930	BY PROTMAP: gi\|814542916\|emb\|CEQ39947.1\| SPOSA6832_01515, partial [Sporidiobolus salmonicolor]; Belongs to the adaptor complexes medium subunit family. (478 aa)
	BN2166_0033610	Uncharacterized protein. (1158 aa)
	BN2166_0045250	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (978 aa)
	BN2166_0018570	Uncharacterized protein. (230 aa)
	BN2166_0029580	GPI inositol-deacylase; Involved in inositol deacylation of GPI-anchored proteins which plays important roles in the quality control and ER-associated degradation of GPI-anchored proteins. (716 aa)
	BN2166_0026330	FGENESH: predicted gene_5.178 protein. (235 aa)
	BN2166_0030700	Alpha/Beta hydrolase fold. (493 aa)
	BN2166_0018280	FGENESH: predicted gene_3.279 protein. (224 aa)
	BN2166_0007960	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (143 aa)
	BN2166_0018650	Uncharacterized protein. (1344 aa)
	BN2166_0005040	Uncharacterized protein. (150 aa)
	BN2166_0004890	Alpha/Beta hydrolase fold. (774 aa)
	BN2166_0003390	annotation not available (153 aa)
	BN2166_0000900	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (273 aa)
	BN2166_0074400	Asp/Glu/hydantoin racemase. (238 aa)
	BN2166_0061310	Alpha/Beta hydrolase fold. (851 aa)
	BN2166_0063130	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (709 aa)
	BN2166_0062800	FGENESH: predicted gene_13.110 protein. (756 aa)

Your Current Organism:

Rhodotorula toruloides

NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN2166_0000900	BN2166_0003390	A0A0K3C3S7	A0A0K3C6J0	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	annotation not available	0.651
BN2166_0000900	BN2166_0005040	A0A0K3C3S7	A0A0K3C739	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	Uncharacterized protein.	0.632
BN2166_0000900	BN2166_0007960	A0A0K3C3S7	A0A0K3C8Y1	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.916
BN2166_0000900	BN2166_0018570	A0A0K3C3S7	A0A0K3CFL1	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	Uncharacterized protein.	0.607
BN2166_0000900	BN2166_0026320	A0A0K3C3S7	A0A0K3CHW1	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.984
BN2166_0000900	BN2166_0026330	A0A0K3C3S7	A0A0K3CDY5	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	FGENESH: predicted gene_5.178 protein.	0.976
BN2166_0000900	BN2166_0029020	A0A0K3C3S7	A0A0K3CII4	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	Ubiquitin-related domain-containing protein.	0.607
BN2166_0000900	BN2166_0034270	A0A0K3C3S7	A0A0K3CK18	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.884
BN2166_0000900	BN2166_0038930	A0A0K3C3S7	A0A0K3CHE6	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	BY PROTMAP: gi\|814542916\|emb\|CEQ39947.1\| SPOSA6832_01515, partial [Sporidiobolus salmonicolor]; Belongs to the adaptor complexes medium subunit family.	0.933
BN2166_0000900	BN2166_0042310	A0A0K3C3S7	A0A0K3CIR4	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	FGENESH: predicted gene_8.86 protein.	0.607
BN2166_0000900	BN2166_0045250	A0A0K3C3S7	A0A0K3CG15	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.947
BN2166_0000900	BN2166_0050110	A0A0K3C3S7	A0A0K3CL16	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	Uncharacterized protein; Belongs to the peptidase S8 family.	0.503
BN2166_0000900	BN2166_0063130	A0A0K3C3S7	A0A0K3CP35	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.884
BN2166_0003390	BN2166_0000900	A0A0K3C6J0	A0A0K3C3S7	annotation not available	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	0.651
BN2166_0003390	BN2166_0007960	A0A0K3C6J0	A0A0K3C8Y1	annotation not available	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.646
BN2166_0003390	BN2166_0018570	A0A0K3C6J0	A0A0K3CFL1	annotation not available	Uncharacterized protein.	0.982
BN2166_0003390	BN2166_0026320	A0A0K3C6J0	A0A0K3CHW1	annotation not available	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.652
BN2166_0003390	BN2166_0026330	A0A0K3C6J0	A0A0K3CDY5	annotation not available	FGENESH: predicted gene_5.178 protein.	0.652
BN2166_0003390	BN2166_0029020	A0A0K3C6J0	A0A0K3CII4	annotation not available	Ubiquitin-related domain-containing protein.	0.938
BN2166_0003390	BN2166_0034270	A0A0K3C6J0	A0A0K3CK18	annotation not available	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.628

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