55 items (Rhodotorula toruloides) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BN2166_0019350	Snf7-domain containing protein. (246 aa)
	BN2166_0010680	BY PROTMAP: gi\|342319928\|gb\|EGU11873.1\| Cysteine peptidase C50 [Rhodotorula glutinis ATCC 204091]. (2219 aa)
	BN2166_0014540	BY PROTMAP: gi\|647401265\|emb\|CDR47393.1\| RHTO0S14e02982g1_1 [Rhodosporidium toruloides]. (287 aa)
	BN2166_0014940	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (316 aa)
	BN2166_0063370	annotation not available (860 aa)
	BN2166_0002700	BY PROTMAP: gi\|342319356\|gb\|EGU11305.1\| polyketide synthase [Rhodotorula glutinis ATCC 204091]. (471 aa)
	BN2166_0003390	annotation not available (153 aa)
	BN2166_0005040	Uncharacterized protein. (150 aa)
	BN2166_0007340	annotation not available (2763 aa)
	BN2166_0006730	Regulator of Vps4 activity in the MVB pathway-domain containing protein. (409 aa)
	BN2166_0018250	Snf7-domain containing protein. (218 aa)
	BN2166_0010190	ELYS domain-containing protein. (742 aa)
	BN2166_0001450	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (214 aa)
	BN2166_0073670	BY PROTMAP: gi\|342320334\|gb\|EGU12275.1\| putative Nucleoporin [Rhodotorula glutinis ATCC 204091]. (2090 aa)
	BN2166_0011410	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (432 aa)
	BN2166_0014930	FGENESH: predicted gene_2.662 protein. (94 aa)
	BN2166_0002670	BY PROTMAP: gi\|647396891\|emb\|CDR39558.1\| RHTO0S04e06436g1_1 [Rhodosporidium toruloides]. (463 aa)
	BN2166_0019510	ANAPC5 domain-containing protein. (680 aa)
	BN2166_0019610	Spindle assembly checkpoint component Mad1. (802 aa)
	BN2166_0020330	HEC/Ndc80p family-domain containing protein. (739 aa)
	BN2166_0020430	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
	BN2166_0006120	Belongs to the ubiquitin-conjugating enzyme family. (154 aa)
	BN2166_0033300	Kinetochore protein spc25. (329 aa)
	BN2166_0008320	FGENESH: predicted gene_2.1 protein. (1085 aa)
	BN2166_0036400	annotation not available (404 aa)
	BN2166_0036600	Man1-Src1p-C-terminal domain-domain containing protein. (875 aa)
	BN2166_0012020	P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1134 aa)
	BN2166_0037750	annotation not available (1333 aa)
	BN2166_0014670	annotation not available (652 aa)
	BN2166_0040550	Uncharacterized protein. (444 aa)
	BN2166_0018570	Uncharacterized protein. (230 aa)
	BN2166_0036190	annotation not available (1753 aa)
	BN2166_0044350	Snf7-domain containing protein. (220 aa)
	BN2166_0037790	FGENESH: predicted gene_7.164 protein. (673 aa)
	BN2166_0065420	BY PROTMAP: gi\|342319023\|gb\|EGU10975.1\| nucleoporin nup189 [Rhodotorula glutinis ATCC 204091]. (982 aa)
	BN2166_0037890	FGENESH: predicted gene_7.174 protein. (532 aa)
	BN2166_0038440	annotation not available (757 aa)
	BN2166_0041190	annotation not available (2526 aa)
	BN2166_0037360	FGENESH: predicted gene_7.121 protein. (663 aa)
	BN2166_0042890	Uncharacterized protein. (218 aa)
	BN2166_0043090	Nuf2 family-domain containing protein. (449 aa)
	BN2166_0029020	Ubiquitin-related domain-containing protein. (154 aa)
	BN2166_0042310	FGENESH: predicted gene_8.86 protein. (1243 aa)
	BN2166_0050490	Nucleoporin Nup120/160-domain containing protein. (1580 aa)
	BN2166_0051090	BY PROTMAP: gi\|647403067\|emb\|CDR49241.1\| RHTO0S24e01596g1_1 [Rhodosporidium toruloides]. (2101 aa)
	BN2166_0059050	BY PROTMAP: gi\|342321222\|gb\|EGU13157.1\| Nucleoporin [Rhodotorula glutinis ATCC 204091]; Belongs to the arginase family. (1940 aa)
	BN2166_0052490	Small ubiquitin-related modifier. (102 aa)
	BN2166_0051480	FGENESH: predicted gene_9.494 protein. (127 aa)
	BN2166_0058340	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II. (722 aa)
	BN2166_0042220	annotation not available (2003 aa)
	BN2166_0064040	RAD26-like SNF2 family DNA-dependent ATPase. (1445 aa)
	BN2166_0074150	BY PROTMAP: gi\|342320357\|gb\|EGU12298.1\| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091]. (3016 aa)
	BN2166_0069410	FGENESH: predicted gene_15.222 protein. (950 aa)
	BN2166_0056420	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (448 aa)
	BN2166_0073080	Uncharacterized protein; Belongs to the AAA ATPase family. (442 aa)

Your Current Organism:

Rhodotorula toruloides

NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN2166_0001450	BN2166_0006120	A0A0K3C408	A0A0K3CC64	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	Belongs to the ubiquitin-conjugating enzyme family.	0.831
BN2166_0001450	BN2166_0007340	A0A0K3C408	A0A0K3C7R5	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	annotation not available	0.732
BN2166_0001450	BN2166_0036190	A0A0K3C408	A0A0K3CFL4	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	annotation not available	0.709
BN2166_0001450	BN2166_0036400	A0A0K3C408	A0A0K3CDJ9	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	annotation not available	0.994
BN2166_0001450	BN2166_0037360	A0A0K3C408	A0A0K3CH73	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	FGENESH: predicted gene_7.121 protein.	0.634
BN2166_0001450	BN2166_0037750	A0A0K3C408	A0A0K3CDV8	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	annotation not available	0.634
BN2166_0001450	BN2166_0037790	A0A0K3C408	A0A0K3CG58	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	FGENESH: predicted gene_7.164 protein.	0.639
BN2166_0001450	BN2166_0037890	A0A0K3C408	A0A0K3CG67	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	FGENESH: predicted gene_7.174 protein.	0.634
BN2166_0001450	BN2166_0042220	A0A0K3C408	A0A0K3CMG7	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	annotation not available	0.649
BN2166_0001450	BN2166_0050490	A0A0K3C408	A0A0K3CJT4	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	Nucleoporin Nup120/160-domain containing protein.	0.611
BN2166_0001450	BN2166_0051090	A0A0K3C408	A0A0K3CJY3	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	BY PROTMAP: gi\|647403067\|emb\|CDR49241.1\| RHTO0S24e01596g1_1 [Rhodosporidium toruloides].	0.647
BN2166_0001450	BN2166_0051480	A0A0K3C408	A0A0K3CKT7	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	FGENESH: predicted gene_9.494 protein.	0.753
BN2166_0001450	BN2166_0052490	A0A0K3C408	A0A0K3CKC9	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	Small ubiquitin-related modifier.	0.753
BN2166_0001450	BN2166_0058340	A0A0K3C408	A0A0K3CM03	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II.	0.994
BN2166_0001450	BN2166_0059050	A0A0K3C408	A0A0K3CK19	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	BY PROTMAP: gi\|342321222\|gb\|EGU13157.1\| Nucleoporin [Rhodotorula glutinis ATCC 204091]; Belongs to the arginase family.	0.674
BN2166_0001450	BN2166_0063370	A0A0K3C408	A0A0K3CTD0	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	annotation not available	0.993
BN2166_0001450	BN2166_0065420	A0A0K3C408	A0A0K3CTW7	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	BY PROTMAP: gi\|342319023\|gb\|EGU10975.1\| nucleoporin nup189 [Rhodotorula glutinis ATCC 204091].	0.788
BN2166_0001450	BN2166_0073670	A0A0K3C408	A0A0K3CVZ5	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	BY PROTMAP: gi\|342320334\|gb\|EGU12275.1\| putative Nucleoporin [Rhodotorula glutinis ATCC 204091].	0.788
BN2166_0002670	BN2166_0036600	A0A0K3CB80	A0A0K3CDL7	BY PROTMAP: gi\|647396891\|emb\|CDR39558.1\| RHTO0S04e06436g1_1 [Rhodosporidium toruloides].	Man1-Src1p-C-terminal domain-domain containing protein.	0.408
BN2166_0002670	BN2166_0063370	A0A0K3CB80	A0A0K3CTD0	BY PROTMAP: gi\|647396891\|emb\|CDR39558.1\| RHTO0S04e06436g1_1 [Rhodosporidium toruloides].	annotation not available	0.788

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