STRINGSTRING
BN2166_0023450 BN2166_0023450 BN2166_0005040 BN2166_0005040 BN2166_0003390 BN2166_0003390 BN2166_0009700 BN2166_0009700 BN2166_0009970 BN2166_0009970 BN2166_0068560 BN2166_0068560 BN2166_0040220 BN2166_0040220 BN2166_0035770 BN2166_0035770 BN2166_0042310 BN2166_0042310 BN2166_0029020 BN2166_0029020 BN2166_0035760 BN2166_0035760 BN2166_0018570 BN2166_0018570 BN2166_0029780 BN2166_0029780 BN2166_0019510 BN2166_0019510 BN2166_0018210 BN2166_0018210 BN2166_0018080 BN2166_0018080 BN2166_0009760 BN2166_0009760
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0023450Belongs to the ubiquitin-conjugating enzyme family. (184 aa)
BN2166_0005040Uncharacterized protein. (150 aa)
BN2166_0003390annotation not available (153 aa)
BN2166_0009700Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (439 aa)
BN2166_0009970Histone H2B; Belongs to the histone H2B family. (144 aa)
BN2166_0068560Uncharacterized protein. (151 aa)
BN2166_0040220BY PROTMAP: gi|814542956|emb|CEQ39987.1| SPOSA6832_01580 [Sporidiobolus salmonicolor]; Belongs to the ubiquitin-conjugating enzyme family. (145 aa)
BN2166_0035770FGENESH: predicted gene_6.499 protein. (94 aa)
BN2166_0042310FGENESH: predicted gene_8.86 protein. (1243 aa)
BN2166_0029020Ubiquitin-related domain-containing protein. (154 aa)
BN2166_0035760Protein kinase domain-containing protein. (345 aa)
BN2166_0018570Uncharacterized protein. (230 aa)
BN2166_0029780Uncharacterized protein. (103 aa)
BN2166_0019510ANAPC5 domain-containing protein. (680 aa)
BN2166_0018210Histone H2B; Belongs to the histone H2B family. (125 aa)
BN2166_0018080Histone H2B; Belongs to the histone H2B family. (138 aa)
BN2166_0009760Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (347 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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