STRINGSTRING
BN2166_0065090 BN2166_0065090 BN2166_0003340 BN2166_0003340 BN2166_0003390 BN2166_0003390 BN2166_0005040 BN2166_0005040 BN2166_0008710 BN2166_0008710 BN2166_0006470 BN2166_0006470 BN2166_0026180 BN2166_0026180 BN2166_0033880 BN2166_0033880 BN2166_0045350 BN2166_0045350 BN2166_0038620 BN2166_0038620 BN2166_0070250 BN2166_0070250 BN2166_0049070 BN2166_0049070
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0065090BY PROTMAP: gi|342319043|gb|EGU10995.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (548 aa)
BN2166_0003340Chloride channel protein. (841 aa)
BN2166_0003390annotation not available (153 aa)
BN2166_0005040Uncharacterized protein. (150 aa)
BN2166_0008710annotation not available (655 aa)
BN2166_0006470Ion_trans domain-containing protein. (240 aa)
BN2166_0026180annotation not available (1217 aa)
BN2166_0033880Belongs to the chloride channel (TC 2.A.49) family. (1632 aa)
BN2166_0045350annotation not available (343 aa)
BN2166_0038620Cyclin-dependent protein kinase inhibitor. (1137 aa)
BN2166_0070250Calcium-activated chloride channel-domain containing protein. (839 aa)
BN2166_0049070annotation not available (1006 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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