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BN2166_0005040 BN2166_0005040 BN2166_0003390 BN2166_0003390 BN2166_0070420 BN2166_0070420 BN2166_0069040 BN2166_0069040 BN2166_0068850 BN2166_0068850 BN2166_0043570 BN2166_0043570 BN2166_0066550 BN2166_0066550 TIF35 TIF35 BN2166_0053210 BN2166_0053210 BN2166_0050140 BN2166_0050140 BN2166_0047440 BN2166_0047440 BN2166_0042310 BN2166_0042310 BN2166_0029020 BN2166_0029020 BN2166_0018570 BN2166_0018570 BN2166_0043600 BN2166_0043600 BN2166_0004870 BN2166_0004870 BN2166_0004860 BN2166_0004860
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0005040Uncharacterized protein. (150 aa)
BN2166_0003390annotation not available (153 aa)
BN2166_0070420Belongs to the nucleosome assembly protein (NAP) family. (278 aa)
BN2166_0069040Dcp2, box A domain-domain containing protein. (855 aa)
BN2166_0068850annotation not available (2160 aa)
BN2166_0043570annotation not available (813 aa)
BN2166_0066550FGENESH: predicted gene_14.205 protein; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (1715 aa)
TIF35Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA. (296 aa)
BN2166_0053210Ribosomal protein S5 domain 2-type fold. (331 aa)
BN2166_0050140BY PROTMAP: gi|342321292|gb|EGU13226.1| Transportin-PC [Rhodotorula glutinis ATCC 204091]. (921 aa)
BN2166_0047440Uncharacterized protein. (804 aa)
BN2166_0042310FGENESH: predicted gene_8.86 protein. (1243 aa)
BN2166_0029020Ubiquitin-related domain-containing protein. (154 aa)
BN2166_0018570Uncharacterized protein. (230 aa)
BN2166_0043600FGENESH: predicted gene_8.215 protein. (875 aa)
BN2166_0004870FGENESH: predicted gene_1.487 protein. (1221 aa)
BN2166_0004860XRN_N domain-containing protein. (205 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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