20 items (Rhodotorula toruloides) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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gene fusions

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Others

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Your Input:
	BN2166_0042240	BY PROTMAP: gi\|342321621\|gb\|EGU13554.1\| HORMA domain protein [Rhodotorula glutinis ATCC 204091]. (224 aa)
	BN2166_0003390	annotation not available (153 aa)
	BN2166_0005040	Uncharacterized protein. (150 aa)
	BN2166_0019750	FGENESH: predicted gene_3.426 protein. (329 aa)
	BN2166_0023450	Belongs to the ubiquitin-conjugating enzyme family. (184 aa)
	BN2166_0019510	ANAPC5 domain-containing protein. (680 aa)
	BN2166_0019760	annotation not available (230 aa)
	BN2166_0024960	Uncharacterized protein. (735 aa)
	BN2166_0030710	Protein-tyrosine phosphatase-like protein. (823 aa)
	BN2166_0018570	Uncharacterized protein. (230 aa)
	BN2166_0019470	annotation not available (650 aa)
	BN2166_0029020	Ubiquitin-related domain-containing protein. (154 aa)
	BN2166_0042310	FGENESH: predicted gene_8.86 protein. (1243 aa)
	BN2166_0031670	BY PROTMAP: gi\|342319608\|gb\|EGU11555.1\| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (694 aa)
	BN2166_0033070	annotation not available (266 aa)
	BN2166_0060000	WD40-repeat-containing domain protein. (599 aa)
	BN2166_0040220	BY PROTMAP: gi\|814542956\|emb\|CEQ39987.1\| SPOSA6832_01580 [Sporidiobolus salmonicolor]; Belongs to the ubiquitin-conjugating enzyme family. (145 aa)
	BN2166_0068350	annotation not available (1501 aa)
	BN2166_0070730	FGENESH: predicted gene_16.99 protein. (810 aa)
	BN2166_0074190	WD40 repeat-like protein. (348 aa)

Your Current Organism:

Rhodotorula toruloides

NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN2166_0003390	BN2166_0018570	A0A0K3C6J0	A0A0K3CFL1	annotation not available	Uncharacterized protein.	0.982
BN2166_0003390	BN2166_0019470	A0A0K3C6J0	A0A0K3CFV8	annotation not available	annotation not available	0.641
BN2166_0003390	BN2166_0019510	A0A0K3C6J0	A0A0K3CC12	annotation not available	ANAPC5 domain-containing protein.	0.748
BN2166_0003390	BN2166_0019750	A0A0K3C6J0	A0A0K3C8P9	annotation not available	FGENESH: predicted gene_3.426 protein.	0.714
BN2166_0003390	BN2166_0019760	A0A0K3C6J0	A0A0K3CC36	annotation not available	annotation not available	0.714
BN2166_0003390	BN2166_0023450	A0A0K3C6J0	A0A0K3C9Q0	annotation not available	Belongs to the ubiquitin-conjugating enzyme family.	0.761
BN2166_0003390	BN2166_0024960	A0A0K3C6J0	A0A0K3CDK6	annotation not available	Uncharacterized protein.	0.882
BN2166_0003390	BN2166_0029020	A0A0K3C6J0	A0A0K3CII4	annotation not available	Ubiquitin-related domain-containing protein.	0.938
BN2166_0003390	BN2166_0031670	A0A0K3C6J0	A0A0K3CJE9	annotation not available	BY PROTMAP: gi\|342319608\|gb\|EGU11555.1\| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091].	0.867
BN2166_0003390	BN2166_0033070	A0A0K3C6J0	A0A0K3CJT6	annotation not available	annotation not available	0.626
BN2166_0003390	BN2166_0040220	A0A0K3C6J0	A0A0K3CLS7	annotation not available	BY PROTMAP: gi\|814542956\|emb\|CEQ39987.1\| SPOSA6832_01580 [Sporidiobolus salmonicolor]; Belongs to the ubiquitin-conjugating enzyme family.	0.905
BN2166_0003390	BN2166_0042240	A0A0K3C6J0	A0A0K3CHG8	annotation not available	BY PROTMAP: gi\|342321621\|gb\|EGU13554.1\| HORMA domain protein [Rhodotorula glutinis ATCC 204091].	0.719
BN2166_0003390	BN2166_0042310	A0A0K3C6J0	A0A0K3CIR4	annotation not available	FGENESH: predicted gene_8.86 protein.	0.937
BN2166_0003390	BN2166_0060000	A0A0K3C6J0	A0A0K3CKE5	annotation not available	WD40-repeat-containing domain protein.	0.714
BN2166_0003390	BN2166_0068350	A0A0K3C6J0	A0A0K3CMT0	annotation not available	annotation not available	0.671
BN2166_0003390	BN2166_0070730	A0A0K3C6J0	A0A0K3CR82	annotation not available	FGENESH: predicted gene_16.99 protein.	0.859
BN2166_0003390	BN2166_0074190	A0A0K3C6J0	A0A0K3CRC7	annotation not available	WD40 repeat-like protein.	0.652
BN2166_0005040	BN2166_0018570	A0A0K3C739	A0A0K3CFL1	Uncharacterized protein.	Uncharacterized protein.	0.773
BN2166_0005040	BN2166_0019470	A0A0K3C739	A0A0K3CFV8	Uncharacterized protein.	annotation not available	0.572
BN2166_0005040	BN2166_0019510	A0A0K3C739	A0A0K3CC12	Uncharacterized protein.	ANAPC5 domain-containing protein.	0.734

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