STRINGSTRING
BN2166_0019340 BN2166_0019340 BN2166_0001470 BN2166_0001470 BN2166_0015580 BN2166_0015580 BN2166_0004910 BN2166_0004910 BN2166_0006790 BN2166_0006790 BN2166_0024310 BN2166_0024310 BN2166_0036450 BN2166_0036450 BN2166_0011770 BN2166_0011770 BN2166_0028860 BN2166_0028860 BN2166_0016820 BN2166_0016820 BN2166_0015520 BN2166_0015520 BN2166_0000300 BN2166_0000300 BN2166_0036440 BN2166_0036440 BN2166_0035660 BN2166_0035660 BN2166_0037530 BN2166_0037530 BN2166_0039780 BN2166_0039780 BN2166_0039660 BN2166_0039660 BN2166_0065300 BN2166_0065300 BN2166_0041370 BN2166_0041370 BN2166_0065340 BN2166_0065340 BN2166_0048320 BN2166_0048320 BN2166_0049020 BN2166_0049020 BN2166_0068240 BN2166_0068240 BN2166_0065310 BN2166_0065310 BN2166_0071340 BN2166_0071340 BN2166_0069270 BN2166_0069270
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0019340Uridylate kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and dUMP as phosphate acceptors, but can also use CMP, dCMP and AMP. Belongs to the adenylate kinase family. UMP-CMP kinase subfamily. (234 aa)
BN2166_0001470BY PROTMAP: gi|647395515|emb|CDR36983.1| RHTO0S02e09406g1_1 [Rhodosporidium toruloides]. (230 aa)
BN2166_0015580Thioredoxin. (109 aa)
BN2166_0004910Thioredoxin; Belongs to the thioredoxin family. (108 aa)
BN2166_0006790BY PROTMAP: gi|342320672|gb|EGU12611.1| putative dCMP deaminase [Rhodotorula glutinis ATCC 204091]. (889 aa)
BN2166_0024310annotation not available (415 aa)
BN2166_0036450Adenylate kinase-domain containing protein; Belongs to the adenylate kinase family. (268 aa)
BN2166_0011770Adenylate kinase isoenzyme 6 homolog; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Has also ATPase activity. May be involved in rRNA maturation and transcription regulation. (187 aa)
BN2166_0028860Ribonucleotide reductase, small chain-domain containing protein. (407 aa)
BN2166_0016820Thioredoxin-like fold. (241 aa)
BN2166_0015520RHTO0S11e00144g1_1. (109 aa)
BN2166_0000300BY PROTMAP: gi|342320601|gb|EGU12540.1| putative dUTPase Dut [Rhodotorula glutinis ATCC 204091]. (259 aa)
BN2166_0036440annotation not available (324 aa)
BN2166_0035660annotation not available (168 aa)
BN2166_0037530Deoxythymidylate kinase. (228 aa)
BN2166_0039780Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism. Adenylate kinase activity is critical for regulation of the phosphate utilization and the AMP de novo biosynthesis pathways. (891 aa)
BN2166_0039660FGENESH: predicted gene_7.351 protein. (679 aa)
BN2166_0065300BY PROTMAP: gi|342319031|gb|EGU10983.1| Thymidylate synthase [Rhodotorula glutinis ATCC 204091]. (417 aa)
BN2166_0041370Nucleoside diphosphate kinase. (149 aa)
BN2166_0065340BY PROTMAP: gi|472585593|gb|EMS23144.1| thioredoxin [Rhodosporidium toruloides NP11]. (103 aa)
BN2166_0048320CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. (595 aa)
BN2166_0049020BY PROTMAP: gi|342321336|gb|EGU13270.1| Glutaredoxin [Rhodotorula glutinis ATCC 204091]. (149 aa)
BN2166_0068240annotation not available (499 aa)
BN2166_0065310BY PROTMAP: gi|342319030|gb|EGU10982.1| Thymidylate synthase [Rhodotorula glutinis ATCC 204091]. (324 aa)
BN2166_0071340P-loop containing nucleoside triphosphate hydrolase protein. (207 aa)
BN2166_0069270Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. (837 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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