STRINGSTRING
BN2166_0005620 BN2166_0005620 BN2166_0005000 BN2166_0005000 BN2166_0003390 BN2166_0003390 BN2166_0005040 BN2166_0005040 BN2166_0012210 BN2166_0012210 BN2166_0004720 BN2166_0004720 BN2166_0027030 BN2166_0027030 BN2166_0018570 BN2166_0018570 BN2166_0038340 BN2166_0038340 BN2166_0036060 BN2166_0036060 BN2166_0048550 BN2166_0048550 BN2166_0029020 BN2166_0029020 BN2166_0042310 BN2166_0042310 BN2166_0057600 BN2166_0057600 BN2166_0056340 BN2166_0056340 BN2166_0067900 BN2166_0067900 BN2166_0059330 BN2166_0059330 BN2166_0062440 BN2166_0062440 BN2166_0074470 BN2166_0074470
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0005620P-loop containing nucleoside triphosphate hydrolase protein. (841 aa)
BN2166_0005000alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (575 aa)
BN2166_0003390annotation not available (153 aa)
BN2166_0005040Uncharacterized protein. (150 aa)
BN2166_0012210annotation not available (396 aa)
BN2166_0004720BY PROTMAP: gi|647396351|emb|CDR38455.1| RHTO0S03e09692g1_1 [Rhodosporidium toruloides]. (582 aa)
BN2166_0027030Glycosyl hydrolase family 85-domain containing protein. (727 aa)
BN2166_0018570Uncharacterized protein. (230 aa)
BN2166_0038340Thioredoxin-like fold. (163 aa)
BN2166_0036060Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (288 aa)
BN2166_0048550alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (997 aa)
BN2166_0029020Ubiquitin-related domain-containing protein. (154 aa)
BN2166_0042310FGENESH: predicted gene_8.86 protein. (1243 aa)
BN2166_0057600Glycoside hydrolase family 63 protein. (808 aa)
BN2166_0056340Glyco_hydro_63 domain-containing protein. (1264 aa)
BN2166_0067900alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (701 aa)
BN2166_0059330Glycosyl hydrolases family 31-domain containing protein. (1499 aa)
BN2166_0062440annotation not available (313 aa)
BN2166_0074470UDP-glucose:Glycoprotein Glucosyltransferase-domain containing protein. (1693 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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