28 items (Rhodotorula toruloides) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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gene fusions

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Your Input:
	BN2166_0003390	annotation not available (153 aa)
	BN2166_0003840	FGENESH: predicted gene_1.384 protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (107 aa)
	BN2166_0005040	Uncharacterized protein. (150 aa)
	BN2166_0007880	annotation not available (261 aa)
	BN2166_0012530	Peptidase family M48-domain containing protein. (394 aa)
	BN2166_0023030	annotation not available (447 aa)
	BN2166_0036050	annotation not available (751 aa)
	BN2166_0035340	Peptidase_M48 domain-containing protein. (1096 aa)
	BN2166_0018570	Uncharacterized protein. (230 aa)
	BN2166_0032110	annotation not available (1070 aa)
	BN2166_0037580	Dynamin central region-domain containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (702 aa)
	BN2166_0024320	Protein kinase-like domain-containing protein. (716 aa)
	BN2166_0042490	annotation not available (134 aa)
	BN2166_0042890	Uncharacterized protein. (218 aa)
	BN2166_0051000	TPR domain-containing protein. (2015 aa)
	BN2166_0029020	Ubiquitin-related domain-containing protein. (154 aa)
	BN2166_0042310	FGENESH: predicted gene_8.86 protein. (1243 aa)
	BN2166_0046660	Putative DNM1-dynamin-related GTPase; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (862 aa)
	BN2166_0051230	BY PROTMAP: gi\|342321243\|gb\|EGU13177.1\| Septin [Rhodotorula glutinis ATCC 204091]; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (1126 aa)
	BN2166_0049310	annotation not available (216 aa)
	BN2166_0066400	annotation not available (857 aa)
	MDE1	Methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P). (229 aa)
	BN2166_0044720	Belongs to the 14-3-3 family. (233 aa)
	BN2166_0062630	BY PROTMAP: gi\|647402023\|emb\|CDR48330.1\| RHTO0S17e01332g2_1 [Rhodosporidium toruloides]. (184 aa)
	BN2166_0049870	BY PROTMAP: gi\|634350156\|gb\|KDE05429.1\| 14-3-3-like protein [Microbotryum violaceum p1A1 Lamole]; Belongs to the 14-3-3 family. (266 aa)
	BN2166_0068160	Protein kinase domain-containing protein. (1070 aa)
	BN2166_0070660	P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (950 aa)
	BN2166_0072670	BY PROTMAP: gi\|814543531\|emb\|CEQ39224.1\| SPOSA6832_00735 [Sporidiobolus salmonicolor]. (177 aa)

Your Current Organism:

Rhodotorula toruloides

NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN2166_0003390	BN2166_0018570	A0A0K3C6J0	A0A0K3CFL1	annotation not available	Uncharacterized protein.	0.982
BN2166_0003390	BN2166_0029020	A0A0K3C6J0	A0A0K3CII4	annotation not available	Ubiquitin-related domain-containing protein.	0.938
BN2166_0003390	BN2166_0036050	A0A0K3C6J0	A0A0K3CDD0	annotation not available	annotation not available	0.891
BN2166_0003390	BN2166_0037580	A0A0K3C6J0	A0A0K3CH27	annotation not available	Dynamin central region-domain containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.460
BN2166_0003390	BN2166_0042310	A0A0K3C6J0	A0A0K3CIR4	annotation not available	FGENESH: predicted gene_8.86 protein.	0.937
BN2166_0003390	BN2166_0046660	A0A0K3C6J0	A0A0K3CK64	annotation not available	Putative DNM1-dynamin-related GTPase; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.460
BN2166_0003390	BN2166_0066400	A0A0K3C6J0	A0A0K3CMB2	annotation not available	annotation not available	0.583
BN2166_0003390	BN2166_0070660	A0A0K3C6J0	A0A0K3CRS7	annotation not available	P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.460
BN2166_0003390	BN2166_0072670	A0A0K3C6J0	A0A0K3CVR4	annotation not available	BY PROTMAP: gi\|814543531\|emb\|CEQ39224.1\| SPOSA6832_00735 [Sporidiobolus salmonicolor].	0.471
BN2166_0003840	BN2166_0036050	A0A0K3C6Q3	A0A0K3CDD0	FGENESH: predicted gene_1.384 protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	annotation not available	0.722
BN2166_0003840	MDE1	A0A0K3C6Q3	A0A0K3CMM2	FGENESH: predicted gene_1.384 protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	Methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P).	0.632
BN2166_0005040	BN2166_0018570	A0A0K3C739	A0A0K3CFL1	Uncharacterized protein.	Uncharacterized protein.	0.773
BN2166_0005040	BN2166_0029020	A0A0K3C739	A0A0K3CII4	Uncharacterized protein.	Ubiquitin-related domain-containing protein.	0.773
BN2166_0005040	BN2166_0036050	A0A0K3C739	A0A0K3CDD0	Uncharacterized protein.	annotation not available	0.708
BN2166_0005040	BN2166_0037580	A0A0K3C739	A0A0K3CH27	Uncharacterized protein.	Dynamin central region-domain containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.460
BN2166_0005040	BN2166_0042310	A0A0K3C739	A0A0K3CIR4	Uncharacterized protein.	FGENESH: predicted gene_8.86 protein.	0.773
BN2166_0005040	BN2166_0046660	A0A0K3C739	A0A0K3CK64	Uncharacterized protein.	Putative DNM1-dynamin-related GTPase; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.460
BN2166_0005040	BN2166_0070660	A0A0K3C739	A0A0K3CRS7	Uncharacterized protein.	P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.460
BN2166_0005040	BN2166_0072670	A0A0K3C739	A0A0K3CVR4	Uncharacterized protein.	BY PROTMAP: gi\|814543531\|emb\|CEQ39224.1\| SPOSA6832_00735 [Sporidiobolus salmonicolor].	0.471
BN2166_0012530	BN2166_0037580	A0A0K3C9S0	A0A0K3CH27	Peptidase family M48-domain containing protein.	Dynamin central region-domain containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.595

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