13 items (Rhodotorula toruloides) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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Predicted Interactions

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Your Input:
	BN2166_0048390	FGENESH: predicted gene_9.185 protein. (101 aa)
	BN2166_0003350	FGENESH: predicted gene_1.335 protein. (322 aa)
	BN2166_0003390	annotation not available (153 aa)
	BN2166_0005040	Uncharacterized protein. (150 aa)
	BN2166_0007490	annotation not available (441 aa)
	BN2166_0024550	FGENESH: predicted gene_4.231 protein. (473 aa)
	BN2166_0035500	Camp-dependent protein kinase regulatory subunit. (551 aa)
	BN2166_0018570	Uncharacterized protein. (230 aa)
	BN2166_0029020	Ubiquitin-related domain-containing protein. (154 aa)
	BN2166_0042310	FGENESH: predicted gene_8.86 protein. (1243 aa)
	BN2166_0048760	annotation not available (472 aa)
	BN2166_0049510	Belongs to the protein kinase superfamily. (493 aa)
	BN2166_0063080	BY PROTMAP: gi\|342319493\|gb\|EGU11441.1\| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (1161 aa)

Your Current Organism:

Rhodotorula toruloides

NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN2166_0003390	BN2166_0018570	A0A0K3C6J0	A0A0K3CFL1	annotation not available	Uncharacterized protein.	0.982
BN2166_0003390	BN2166_0029020	A0A0K3C6J0	A0A0K3CII4	annotation not available	Ubiquitin-related domain-containing protein.	0.938
BN2166_0003390	BN2166_0042310	A0A0K3C6J0	A0A0K3CIR4	annotation not available	FGENESH: predicted gene_8.86 protein.	0.937
BN2166_0003390	BN2166_0048390	A0A0K3C6J0	A0A061AXA9	annotation not available	FGENESH: predicted gene_9.185 protein.	0.947
BN2166_0005040	BN2166_0018570	A0A0K3C739	A0A0K3CFL1	Uncharacterized protein.	Uncharacterized protein.	0.773
BN2166_0005040	BN2166_0029020	A0A0K3C739	A0A0K3CII4	Uncharacterized protein.	Ubiquitin-related domain-containing protein.	0.773
BN2166_0005040	BN2166_0042310	A0A0K3C739	A0A0K3CIR4	Uncharacterized protein.	FGENESH: predicted gene_8.86 protein.	0.773
BN2166_0005040	BN2166_0048390	A0A0K3C739	A0A061AXA9	Uncharacterized protein.	FGENESH: predicted gene_9.185 protein.	0.838
BN2166_0018570	BN2166_0003390	A0A0K3CFL1	A0A0K3C6J0	Uncharacterized protein.	annotation not available	0.982
BN2166_0018570	BN2166_0005040	A0A0K3CFL1	A0A0K3C739	Uncharacterized protein.	Uncharacterized protein.	0.773
BN2166_0018570	BN2166_0048390	A0A0K3CFL1	A0A061AXA9	Uncharacterized protein.	FGENESH: predicted gene_9.185 protein.	0.846
BN2166_0024550	BN2166_0035500	A0A0K3CA14	A0A0K3CD72	FGENESH: predicted gene_4.231 protein.	Camp-dependent protein kinase regulatory subunit.	0.994
BN2166_0024550	BN2166_0048760	A0A0K3CA14	A0A0K3CKP1	FGENESH: predicted gene_4.231 protein.	annotation not available	0.678
BN2166_0024550	BN2166_0049510	A0A0K3CA14	A0A0K3CKV3	FGENESH: predicted gene_4.231 protein.	Belongs to the protein kinase superfamily.	0.711
BN2166_0029020	BN2166_0003390	A0A0K3CII4	A0A0K3C6J0	Ubiquitin-related domain-containing protein.	annotation not available	0.938
BN2166_0029020	BN2166_0005040	A0A0K3CII4	A0A0K3C739	Ubiquitin-related domain-containing protein.	Uncharacterized protein.	0.773
BN2166_0029020	BN2166_0048390	A0A0K3CII4	A0A061AXA9	Ubiquitin-related domain-containing protein.	FGENESH: predicted gene_9.185 protein.	0.846
BN2166_0035500	BN2166_0024550	A0A0K3CD72	A0A0K3CA14	Camp-dependent protein kinase regulatory subunit.	FGENESH: predicted gene_4.231 protein.	0.994
BN2166_0035500	BN2166_0048760	A0A0K3CD72	A0A0K3CKP1	Camp-dependent protein kinase regulatory subunit.	annotation not available	0.966
BN2166_0035500	BN2166_0049510	A0A0K3CD72	A0A0K3CKV3	Camp-dependent protein kinase regulatory subunit.	Belongs to the protein kinase superfamily.	0.996

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