10 items (Rhodotorula toruloides) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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Predicted Interactions

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Your Input:
	BN2166_0009970	Histone H2B; Belongs to the histone H2B family. (144 aa)
	BN2166_0018080	Histone H2B; Belongs to the histone H2B family. (138 aa)
	BN2166_0018210	Histone H2B; Belongs to the histone H2B family. (125 aa)
	BN2166_0029230	EGF-like domain-containing protein. (1093 aa)
	BN2166_0038110	annotation not available (926 aa)
	BN2166_0027520	annotation not available (189 aa)
	BN2166_0066550	FGENESH: predicted gene_14.205 protein; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (1715 aa)
	BN2166_0044720	Belongs to the 14-3-3 family. (233 aa)
	BN2166_0049870	BY PROTMAP: gi\|634350156\|gb\|KDE05429.1\| 14-3-3-like protein [Microbotryum violaceum p1A1 Lamole]; Belongs to the 14-3-3 family. (266 aa)
	BN2166_0061820	Serine/threonine-protein kinase ksg1. (1148 aa)

Your Current Organism:

Rhodotorula toruloides

NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN2166_0027520	BN2166_0038110	A0A0K3CI50	A0A0K3CHD7	annotation not available	annotation not available	0.621
BN2166_0027520	BN2166_0044720	A0A0K3CI50	A0A0K3CN55	annotation not available	Belongs to the 14-3-3 family.	0.566
BN2166_0027520	BN2166_0049870	A0A0K3CI50	A0A0K3CPL0	annotation not available	BY PROTMAP: gi\|634350156\|gb\|KDE05429.1\| 14-3-3-like protein [Microbotryum violaceum p1A1 Lamole]; Belongs to the 14-3-3 family.	0.566
BN2166_0027520	BN2166_0061820	A0A0K3CI50	A0A0K3CT02	annotation not available	Serine/threonine-protein kinase ksg1.	0.633
BN2166_0027520	BN2166_0066550	A0A0K3CI50	A0A0K3CMC6	annotation not available	FGENESH: predicted gene_14.205 protein; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	0.866
BN2166_0029230	BN2166_0038110	A0A0K3CER5	A0A0K3CHD7	EGF-like domain-containing protein.	annotation not available	0.621
BN2166_0029230	BN2166_0044720	A0A0K3CER5	A0A0K3CN55	EGF-like domain-containing protein.	Belongs to the 14-3-3 family.	0.566
BN2166_0029230	BN2166_0049870	A0A0K3CER5	A0A0K3CPL0	EGF-like domain-containing protein.	BY PROTMAP: gi\|634350156\|gb\|KDE05429.1\| 14-3-3-like protein [Microbotryum violaceum p1A1 Lamole]; Belongs to the 14-3-3 family.	0.566
BN2166_0029230	BN2166_0061820	A0A0K3CER5	A0A0K3CT02	EGF-like domain-containing protein.	Serine/threonine-protein kinase ksg1.	0.633
BN2166_0029230	BN2166_0066550	A0A0K3CER5	A0A0K3CMC6	EGF-like domain-containing protein.	FGENESH: predicted gene_14.205 protein; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	0.866
BN2166_0038110	BN2166_0027520	A0A0K3CHD7	A0A0K3CI50	annotation not available	annotation not available	0.621
BN2166_0038110	BN2166_0029230	A0A0K3CHD7	A0A0K3CER5	annotation not available	EGF-like domain-containing protein.	0.621
BN2166_0038110	BN2166_0044720	A0A0K3CHD7	A0A0K3CN55	annotation not available	Belongs to the 14-3-3 family.	0.943
BN2166_0038110	BN2166_0049870	A0A0K3CHD7	A0A0K3CPL0	annotation not available	BY PROTMAP: gi\|634350156\|gb\|KDE05429.1\| 14-3-3-like protein [Microbotryum violaceum p1A1 Lamole]; Belongs to the 14-3-3 family.	0.943
BN2166_0038110	BN2166_0066550	A0A0K3CHD7	A0A0K3CMC6	annotation not available	FGENESH: predicted gene_14.205 protein; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	0.807
BN2166_0044720	BN2166_0027520	A0A0K3CN55	A0A0K3CI50	Belongs to the 14-3-3 family.	annotation not available	0.566
BN2166_0044720	BN2166_0029230	A0A0K3CN55	A0A0K3CER5	Belongs to the 14-3-3 family.	EGF-like domain-containing protein.	0.566
BN2166_0044720	BN2166_0038110	A0A0K3CN55	A0A0K3CHD7	Belongs to the 14-3-3 family.	annotation not available	0.943
BN2166_0044720	BN2166_0049870	A0A0K3CN55	A0A0K3CPL0	Belongs to the 14-3-3 family.	BY PROTMAP: gi\|634350156\|gb\|KDE05429.1\| 14-3-3-like protein [Microbotryum violaceum p1A1 Lamole]; Belongs to the 14-3-3 family.	0.891
BN2166_0044720	BN2166_0066550	A0A0K3CN55	A0A0K3CMC6	Belongs to the 14-3-3 family.	FGENESH: predicted gene_14.205 protein; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	0.797

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