47 items (Rhodotorula toruloides) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BN2166_0009700	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (439 aa)
	BN2166_0003390	annotation not available (153 aa)
	BN2166_0005040	Uncharacterized protein. (150 aa)
	BN2166_0006180	BY PROTMAP: gi\|342320697\|gb\|EGU12636.1\| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091]. (970 aa)
	BN2166_0019100	annotation not available (460 aa)
	BN2166_0009630	annotation not available (367 aa)
	BN2166_0009760	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (347 aa)
	BN2166_0022150	Phospholipase/Carboxylesterase-domain containing protein. (288 aa)
	BN2166_0016880	FGENESH: predicted gene_3.139 protein. (274 aa)
	BN2166_0019630	FGENESH: predicted gene_3.414 protein. (482 aa)
	BN2166_0031200	BY PROTMAP: gi\|647403364\|emb\|CDR49492.1\| RHTO0S27e00804g2_1 [Rhodosporidium toruloides]. (1109 aa)
	BN2166_0019210	BY PROTMAP: gi\|342320098\|gb\|EGU12041.1\| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (480 aa)
	BN2166_0019810	BY PROTMAP: gi\|342320125\|gb\|EGU12068.1\| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (610 aa)
	BN2166_0032250	Prohibitin. (272 aa)
	BN2166_0032700	Nuclear mRNA splicing protein. (306 aa)
	BN2166_0007570	Phosphatidylethanolamine-binding protein PEBP. (294 aa)
	BN2166_0007870	FGENESH: predicted gene_1.787 protein. (706 aa)
	BN2166_0026380	FGENESH: predicted gene_5.183 protein; Belongs to the small GTPase superfamily. Arf family. (236 aa)
	BN2166_0034040	annotation not available (542 aa)
	BN2166_0030910	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. (461 aa)
	BN2166_0018570	Uncharacterized protein. (230 aa)
	BN2166_0019320	BY PROTMAP: gi\|342320101\|gb\|EGU12044.1\| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (756 aa)
	BN2166_0019620	Uncharacterized protein. (552 aa)
	BN2166_0033060	annotation not available (470 aa)
	BN2166_0020320	FGENESH: predicted gene_3.483 protein. (432 aa)
	BN2166_0034560	Uncharacterized protein. (533 aa)
	BN2166_0035960	annotation not available (644 aa)
	BN2166_0029020	Ubiquitin-related domain-containing protein. (154 aa)
	BN2166_0042310	FGENESH: predicted gene_8.86 protein. (1243 aa)
	BN2166_0044560	BY PROTMAP: gi\|342321529\|gb\|EGU13462.1\| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (415 aa)
	BN2166_0032320	Uncharacterized protein. (156 aa)
	BN2166_0047980	FGENESH: predicted gene_9.144 protein. (677 aa)
	BN2166_0062150	annotation not available (376 aa)
	BN2166_0058140	annotation not available (653 aa)
	BN2166_0065850	Salivary gland secretion 1. (603 aa)
	BN2166_0055710	FGENESH: predicted gene_11.67 protein. (495 aa)
	BN2166_0044470	Uncharacterized protein. (322 aa)
	BN2166_0044570	BY PROTMAP: gi\|342321528\|gb\|EGU13461.1\| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (371 aa)
	BN2166_0066340	Protein kinase-like domain-containing protein. (511 aa)
	BN2166_0062010	FGENESH: predicted gene_13.31 protein. (345 aa)
	BN2166_0074100	Cell wall surface anchored protein. (581 aa)
	BN2166_0065930	BY PROTMAP: gi\|342319003\|gb\|EGU10955.1\| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (726 aa)
	BN2166_0054520	Acyl-protein thioesterase 1. (229 aa)
	BN2166_0069410	FGENESH: predicted gene_15.222 protein. (950 aa)
	BN2166_0074610	BY PROTMAP: gi\|647401091\|emb\|CDR47060.1\| RHTO0S13e05446g1_1 [Rhodosporidium toruloides]. (336 aa)
	BN2166_0068920	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (538 aa)
	BN2166_0073620	annotation not available (1055 aa)

Your Current Organism:

Rhodotorula toruloides

NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN2166_0003390	BN2166_0007870	A0A0K3C6J0	A0A0K3CCN1	annotation not available	FGENESH: predicted gene_1.787 protein.	0.712
BN2166_0003390	BN2166_0009700	A0A0K3C6J0	A0A0K3C5Y7	annotation not available	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.418
BN2166_0003390	BN2166_0009760	A0A0K3C6J0	A0A0K3C9B7	annotation not available	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.418
BN2166_0003390	BN2166_0018570	A0A0K3C6J0	A0A0K3CFL1	annotation not available	Uncharacterized protein.	0.982
BN2166_0003390	BN2166_0029020	A0A0K3C6J0	A0A0K3CII4	annotation not available	Ubiquitin-related domain-containing protein.	0.938
BN2166_0003390	BN2166_0042310	A0A0K3C6J0	A0A0K3CIR4	annotation not available	FGENESH: predicted gene_8.86 protein.	0.937
BN2166_0003390	BN2166_0069410	A0A0K3C6J0	A0A0K3CRG0	annotation not available	FGENESH: predicted gene_15.222 protein.	0.584
BN2166_0005040	BN2166_0007870	A0A0K3C739	A0A0K3CCN1	Uncharacterized protein.	FGENESH: predicted gene_1.787 protein.	0.696
BN2166_0005040	BN2166_0009700	A0A0K3C739	A0A0K3C5Y7	Uncharacterized protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.418
BN2166_0005040	BN2166_0009760	A0A0K3C739	A0A0K3C9B7	Uncharacterized protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.418
BN2166_0005040	BN2166_0018570	A0A0K3C739	A0A0K3CFL1	Uncharacterized protein.	Uncharacterized protein.	0.773
BN2166_0005040	BN2166_0029020	A0A0K3C739	A0A0K3CII4	Uncharacterized protein.	Ubiquitin-related domain-containing protein.	0.773
BN2166_0005040	BN2166_0042310	A0A0K3C739	A0A0K3CIR4	Uncharacterized protein.	FGENESH: predicted gene_8.86 protein.	0.773
BN2166_0005040	BN2166_0069410	A0A0K3C739	A0A0K3CRG0	Uncharacterized protein.	FGENESH: predicted gene_15.222 protein.	0.584
BN2166_0006180	BN2166_0009700	A0A0K3C803	A0A0K3C5Y7	BY PROTMAP: gi\|342320697\|gb\|EGU12636.1\| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091].	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.640
BN2166_0006180	BN2166_0009760	A0A0K3C803	A0A0K3C9B7	BY PROTMAP: gi\|342320697\|gb\|EGU12636.1\| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091].	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.640
BN2166_0006180	BN2166_0031200	A0A0K3C803	A0A0K3CBY6	BY PROTMAP: gi\|342320697\|gb\|EGU12636.1\| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091].	BY PROTMAP: gi\|647403364\|emb\|CDR49492.1\| RHTO0S27e00804g2_1 [Rhodosporidium toruloides].	0.401
BN2166_0007570	BN2166_0009700	A0A0K3CCK4	A0A0K3C5Y7	Phosphatidylethanolamine-binding protein PEBP.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.428
BN2166_0007570	BN2166_0009760	A0A0K3CCK4	A0A0K3C9B7	Phosphatidylethanolamine-binding protein PEBP.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.428
BN2166_0007570	BN2166_0019810	A0A0K3CCK4	A0A0K3CC40	Phosphatidylethanolamine-binding protein PEBP.	BY PROTMAP: gi\|342320125\|gb\|EGU12068.1\| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091].	0.462

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