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BN2166_0003390 BN2166_0003390 BN2166_0009200 BN2166_0009200 BN2166_0005040 BN2166_0005040 BN2166_0009410 BN2166_0009410 BN2166_0005620 BN2166_0005620 BN2166_0032500 BN2166_0032500 BN2166_0022310 BN2166_0022310 BN2166_0042250 BN2166_0042250 BN2166_0018570 BN2166_0018570 BN2166_0025370 BN2166_0025370 BN2166_0073480 BN2166_0073480 BN2166_0029020 BN2166_0029020 BN2166_0042310 BN2166_0042310 BN2166_0048030 BN2166_0048030 BN2166_0038170 BN2166_0038170 BN2166_0062750 BN2166_0062750 BN2166_0063530 BN2166_0063530
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0003390annotation not available (153 aa)
BN2166_0009200annotation not available (600 aa)
BN2166_0005040Uncharacterized protein. (150 aa)
BN2166_0009410FGENESH: predicted gene_2.110 protein. (325 aa)
BN2166_0005620P-loop containing nucleoside triphosphate hydrolase protein. (841 aa)
BN2166_0032500BY PROTMAP: gi|342319636|gb|EGU11583.1| Epiglycanin [Rhodotorula glutinis ATCC 204091]. (394 aa)
BN2166_0022310Uncharacterized protein. (1239 aa)
BN2166_0042250Translation factor GUF1, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (721 aa)
BN2166_0018570Uncharacterized protein. (230 aa)
BN2166_0025370FGENESH: predicted gene_5.82 protein. (686 aa)
BN2166_0073480annotation not available (846 aa)
BN2166_0029020Ubiquitin-related domain-containing protein. (154 aa)
BN2166_0042310FGENESH: predicted gene_8.86 protein. (1243 aa)
BN2166_0048030Valosin-containing protein; Belongs to the AAA ATPase family. (823 aa)
BN2166_0038170annotation not available (347 aa)
BN2166_0062750BY PROTMAP: gi|647402010|emb|CDR48317.1| RHTO0S17e01068g1_1 [Rhodosporidium toruloides]. (298 aa)
BN2166_0063530OTU domain-containing protein. (420 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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