STRINGSTRING
BN2166_0018080 BN2166_0018080 BN2166_0064910 BN2166_0064910 BN2166_0063890 BN2166_0063890 BN2166_0045720 BN2166_0045720 BN2166_0062440 BN2166_0062440 BN2166_0064900 BN2166_0064900 BN2166_0042310 BN2166_0042310 BN2166_0029020 BN2166_0029020 BN2166_0025470 BN2166_0025470 BN2166_0045950 BN2166_0045950 BN2166_0018570 BN2166_0018570 BN2166_0029630 BN2166_0029630 BN2166_0028330 BN2166_0028330 BN2166_0010420 BN2166_0010420 BN2166_0021260 BN2166_0021260 BN2166_0018210 BN2166_0018210 BN2166_0064920 BN2166_0064920 BN2166_0005410 BN2166_0005410 BN2166_0005040 BN2166_0005040 BN2166_0003390 BN2166_0003390 BN2166_0009970 BN2166_0009970
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0018080Histone H2B; Belongs to the histone H2B family. (138 aa)
BN2166_0064910FGENESH: predicted gene_14.41 protein. (914 aa)
BN2166_0063890annotation not available (778 aa)
BN2166_0045720Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (743 aa)
BN2166_0062440annotation not available (313 aa)
BN2166_0064900Uncharacterized protein. (189 aa)
BN2166_0042310FGENESH: predicted gene_8.86 protein. (1243 aa)
BN2166_0029020Ubiquitin-related domain-containing protein. (154 aa)
BN2166_0025470FGENESH: predicted gene_5.92 protein. (378 aa)
BN2166_0045950Serine/threonine-protein kinase Tel1; Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR), ultraviolet light (UV), or DNA replication stalling, thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates histone H2A to form H2AS128ph (gamma-H2A) at sites of DNA damage, involved in the regulation of DNA damage response mechanism. Required for the control of telomere length and genome stability; Belongs to the PI3/PI4-kinase family. ATM subfamily. (3051 aa)
BN2166_0018570Uncharacterized protein. (230 aa)
BN2166_0029630annotation not available (1156 aa)
BN2166_0028330FGENESH: predicted gene_5.378 protein. (732 aa)
BN2166_0010420BY PROTMAP: gi|342319914|gb|EGU11859.1| Membrane protein [Rhodotorula glutinis ATCC 204091]. (1070 aa)
BN2166_0021260Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (570 aa)
BN2166_0018210Histone H2B; Belongs to the histone H2B family. (125 aa)
BN2166_0064920AAA_23 domain-containing protein. (197 aa)
BN2166_0005410FGENESH: predicted gene_1.541 protein. (1044 aa)
BN2166_0005040Uncharacterized protein. (150 aa)
BN2166_0003390annotation not available (153 aa)
BN2166_0009970Histone H2B; Belongs to the histone H2B family. (144 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.