Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BN2166_0005150 | BN2166_0006320 | A0A0K3C4S7 | A0A0K3CCB5 | annotation not available | Rad51-associated protein Brh2. | 0.708 |
| BN2166_0005150 | BN2166_0007140 | A0A0K3C4S7 | A0A0K3C7P7 | annotation not available | BY PROTMAP: gi|647394924|emb|CDR36159.1| RHTO0S01e15544g1_1 [Rhodosporidium toruloides]. | 0.858 |
| BN2166_0005150 | BN2166_0011180 | A0A0K3C4S7 | A0A0K3C9D3 | annotation not available | BY PROTMAP: gi|342319958|gb|EGU11903.1| RAD51-like protein 2 ISS [Rhodotorula glutinis ATCC 204091]. | 0.659 |
| BN2166_0005150 | BN2166_0015970 | A0A0K3C4S7 | A0A0K3CEW2 | annotation not available | DUF1767 domain-containing protein. | 0.677 |
| BN2166_0005150 | BN2166_0018610 | A0A0K3C4S7 | A0A0K3CBS8 | annotation not available | annotation not available | 0.608 |
| BN2166_0005150 | BN2166_0028130 | A0A0K3C4S7 | A0A0K3CEG1 | annotation not available | FGENESH: predicted gene_5.358 protein. | 0.684 |
| BN2166_0005150 | BN2166_0035600 | A0A0K3C4S7 | A0A0K3CD84 | annotation not available | DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. | 0.707 |
| BN2166_0005150 | BN2166_0036510 | A0A0K3C4S7 | A0A0K3CGZ6 | annotation not available | annotation not available | 0.634 |
| BN2166_0005150 | BN2166_0047320 | A0A0K3C4S7 | A0A0K3CNW7 | annotation not available | BY PROTMAP: gi|342319987|gb|EGU11932.1| putative Endonuclease [Rhodotorula glutinis ATCC 204091]. | 0.988 |
| BN2166_0005150 | BN2166_0054030 | A0A0K3C4S7 | A0A0K3CLF6 | annotation not available | Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. | 0.821 |
| BN2166_0005150 | BN2166_0064520 | A0A0K3C4S7 | A0A0K3CTP2 | annotation not available | BY PROTMAP: gi|472585507|gb|EMS23058.1| bloom syndrome protein [Rhodosporidium toruloides NP11]. | 0.608 |
| BN2166_0005150 | BN2166_0064690 | A0A0K3C4S7 | A0A0K3CNN9 | annotation not available | BY PROTMAP: gi|342319058|gb|EGU11010.1| putative RAD57 protein [Rhodotorula glutinis ATCC 204091]. | 0.702 |
| BN2166_0005150 | BN2166_0072770 | A0A0K3C4S7 | A0A0K3CVS3 | annotation not available | Rad51 domain-containing protein. | 0.604 |
| BN2166_0006320 | BN2166_0005150 | A0A0K3CCB5 | A0A0K3C4S7 | Rad51-associated protein Brh2. | annotation not available | 0.708 |
| BN2166_0006320 | BN2166_0007140 | A0A0K3CCB5 | A0A0K3C7P7 | Rad51-associated protein Brh2. | BY PROTMAP: gi|647394924|emb|CDR36159.1| RHTO0S01e15544g1_1 [Rhodosporidium toruloides]. | 0.762 |
| BN2166_0006320 | BN2166_0011180 | A0A0K3CCB5 | A0A0K3C9D3 | Rad51-associated protein Brh2. | BY PROTMAP: gi|342319958|gb|EGU11903.1| RAD51-like protein 2 ISS [Rhodotorula glutinis ATCC 204091]. | 0.965 |
| BN2166_0006320 | BN2166_0015970 | A0A0K3CCB5 | A0A0K3CEW2 | Rad51-associated protein Brh2. | DUF1767 domain-containing protein. | 0.664 |
| BN2166_0006320 | BN2166_0018610 | A0A0K3CCB5 | A0A0K3CBS8 | Rad51-associated protein Brh2. | annotation not available | 0.741 |
| BN2166_0006320 | BN2166_0028130 | A0A0K3CCB5 | A0A0K3CEG1 | Rad51-associated protein Brh2. | FGENESH: predicted gene_5.358 protein. | 0.832 |
| BN2166_0006320 | BN2166_0035600 | A0A0K3CCB5 | A0A0K3CD84 | Rad51-associated protein Brh2. | DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. | 0.731 |
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