STRINGSTRING
BN2166_0010130 BN2166_0010130 BN2166_0010220 BN2166_0010220 BN2166_0013720 BN2166_0013720 BN2166_0040900 BN2166_0040900 BN2166_0034040 BN2166_0034040 BN2166_0044150 BN2166_0044150 BN2166_0035960 BN2166_0035960 BN2166_0049240 BN2166_0049240 BN2166_0066340 BN2166_0066340 BN2166_0065030 BN2166_0065030 BN2166_0052620 BN2166_0052620 BN2166_0074440 BN2166_0074440
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0010130BY PROTMAP: gi|342319901|gb|EGU11846.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (1787 aa)
BN2166_0010220FGENESH: predicted gene_2.191 protein. (1182 aa)
BN2166_0013720Chromatin modification-related protein. (403 aa)
BN2166_0040900Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (1342 aa)
BN2166_0034040annotation not available (542 aa)
BN2166_0044150annotation not available (1957 aa)
BN2166_0035960annotation not available (644 aa)
BN2166_0049240Peptidyl-prolyl cis-trans isomerase. (179 aa)
BN2166_0066340Protein kinase-like domain-containing protein. (511 aa)
BN2166_0065030Chromatin modification-related protein. (502 aa)
BN2166_0052620Histone acetyltransferase subunit NuA4-domain containing protein. (187 aa)
BN2166_0074440annotation not available (1033 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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