STRINGSTRING
BN2166_0052260 BN2166_0052260 BN2166_0065240 BN2166_0065240 BN2166_0070730 BN2166_0070730 BN2166_0074240 BN2166_0074240 BN2166_0057520 BN2166_0057520 BN2166_0048390 BN2166_0048390 BN2166_0003390 BN2166_0003390 BN2166_0005040 BN2166_0005040 BN2166_0002460 BN2166_0002460 BN2166_0010040 BN2166_0010040 BN2166_0023950 BN2166_0023950 BN2166_0019510 BN2166_0019510 BN2166_0018570 BN2166_0018570 BN2166_0037190 BN2166_0037190 BN2166_0038290 BN2166_0038290 BN2166_0037180 BN2166_0037180 BN2166_0029020 BN2166_0029020 BN2166_0042310 BN2166_0042310 BN2166_0044580 BN2166_0044580 BN2166_0045430 BN2166_0045430 BN2166_0031070 BN2166_0031070 BN2166_0033070 BN2166_0033070 BN2166_0053080 BN2166_0053080
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0052260Belongs to the cyclin family. (651 aa)
BN2166_0065240Belongs to the cyclin family. (606 aa)
BN2166_0070730FGENESH: predicted gene_16.99 protein. (810 aa)
BN2166_0074240BY PROTMAP: gi|647401048|emb|CDR46990.1| RHTO0S13e04478g1_1 [Rhodosporidium toruloides]; Belongs to the protein kinase superfamily. (294 aa)
BN2166_0057520DNA helicase; Belongs to the MCM family. (731 aa)
BN2166_0048390FGENESH: predicted gene_9.185 protein. (101 aa)
BN2166_0003390annotation not available (153 aa)
BN2166_0005040Uncharacterized protein. (150 aa)
BN2166_0002460BY PROTMAP: gi|814541099|emb|CEQ41539.1| SPOSA6832_03267 [Sporidiobolus salmonicolor]; Belongs to the cyclin family. (517 aa)
BN2166_0010040DNA helicase; Belongs to the MCM family. (2462 aa)
BN2166_0023950DNA helicase; Belongs to the MCM family. (1074 aa)
BN2166_0019510ANAPC5 domain-containing protein. (680 aa)
BN2166_0018570Uncharacterized protein. (230 aa)
BN2166_0037190Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (708 aa)
BN2166_0038290DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (773 aa)
BN2166_0037180Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (924 aa)
BN2166_0029020Ubiquitin-related domain-containing protein. (154 aa)
BN2166_0042310FGENESH: predicted gene_8.86 protein. (1243 aa)
BN2166_0044580DNA helicase; Belongs to the MCM family. (939 aa)
BN2166_0045430Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily. (328 aa)
BN2166_0031070P-loop containing nucleoside triphosphate hydrolase protein. (687 aa)
BN2166_0033070annotation not available (266 aa)
BN2166_0053080DNA helicase; Belongs to the MCM family. (880 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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