STRINGSTRING
BN2166_0047540 BN2166_0047540 BN2166_0075320 BN2166_0075320 BN2166_0075020 BN2166_0075020 BN2166_0074820 BN2166_0074820 BN2166_0072770 BN2166_0072770 BN2166_0068670 BN2166_0068670 BN2166_0068020 BN2166_0068020 BN2166_0065470 BN2166_0065470 BN2166_0064920 BN2166_0064920 BN2166_0064520 BN2166_0064520 BN2166_0063270 BN2166_0063270 BN2166_0075110 BN2166_0075110 BN2166_0074810 BN2166_0074810 BN2166_0074560 BN2166_0074560 BN2166_0074460 BN2166_0074460 BN2166_0060970 BN2166_0060970 BN2166_0060170 BN2166_0060170 BN2166_0072510 BN2166_0072510 BN2166_0059220 BN2166_0059220 BN2166_0071760 BN2166_0071760 BN2166_0073480 BN2166_0073480 BN2166_0074290 BN2166_0074290 BN2166_0070430 BN2166_0070430 BN2166_0067860 BN2166_0067860 BN2166_0067660 BN2166_0067660 BN2166_0070030 BN2166_0070030 BN2166_0067410 BN2166_0067410 BN2166_0054770 BN2166_0054770 BN2166_0067780 BN2166_0067780 BN2166_0067080 BN2166_0067080 BN2166_0064910 BN2166_0064910 UNG1 UNG1 BN2166_0063210 BN2166_0063210 BN2166_0074350 BN2166_0074350 BN2166_0067240 BN2166_0067240 BN2166_0048770 BN2166_0048770 BN2166_0072000 BN2166_0072000 BN2166_0071700 BN2166_0071700 BN2166_0047320 BN2166_0047320 BN2166_0064690 BN2166_0064690 BN2166_0063990 BN2166_0063990 BN2166_0058860 BN2166_0058860 BN2166_0063890 BN2166_0063890 BN2166_0045720 BN2166_0045720 BN2166_0063590 BN2166_0063590 BN2166_0060380 BN2166_0060380 BN2166_0062490 BN2166_0062490 BN2166_0062440 BN2166_0062440 BN2166_0059430 BN2166_0059430 BN2166_0061590 BN2166_0061590 BN2166_0066300 BN2166_0066300 BN2166_0066250 BN2166_0066250 BN2166_0058590 BN2166_0058590 BN2166_0065250 BN2166_0065250 BN2166_0057990 BN2166_0057990 BN2166_0040470 BN2166_0040470 BN2166_0064900 BN2166_0064900 BN2166_0052460 BN2166_0052460 BN2166_0051960 BN2166_0051960 BN2166_0054480 BN2166_0054480 BN2166_0054230 BN2166_0054230 BN2166_0054030 BN2166_0054030 BN2166_0055740 BN2166_0055740 BN2166_0062550 BN2166_0062550 BN2166_0052980 BN2166_0052980 BN2166_0036720 BN2166_0036720 BN2166_0036420 BN2166_0036420 BN2166_0061100 BN2166_0061100 BN2166_0060450 BN2166_0060450 BN2166_0047260 BN2166_0047260 BN2166_0052190 BN2166_0052190 BN2166_0046860 BN2166_0046860 BN2166_0034820 BN2166_0034820 BN2166_0033270 BN2166_0033270 BN2166_0050590 BN2166_0050590 BN2166_0033120 BN2166_0033120 BN2166_0046210 BN2166_0046210 BN2166_0057500 BN2166_0057500 BN2166_0045460 BN2166_0045460 BN2166_0031420 BN2166_0031420 BN2166_0045780 BN2166_0045780 BN2166_0043710 BN2166_0043710 BN2166_0030670 BN2166_0030670 BN2166_0044630 BN2166_0044630 BN2166_0042310 BN2166_0042310 BN2166_0043930 BN2166_0043930 BN2166_0041660 BN2166_0041660 BN2166_0029020 BN2166_0029020 BN2166_0053250 BN2166_0053250 BN2166_0046090 BN2166_0046090 BN2166_0027320 BN2166_0027320 BN2166_0026970 BN2166_0026970 BN2166_0026870 BN2166_0026870 BN2166_0026670 BN2166_0026670 BN2166_0038760 BN2166_0038760 BN2166_0050150 BN2166_0050150 BN2166_0025470 BN2166_0025470 BN2166_0042140 BN2166_0042140 BN2166_0038730 BN2166_0038730 BN2166_0037810 BN2166_0037810 BN2166_0023220 BN2166_0023220 BN2166_0036510 BN2166_0036510 BN2166_0040640 BN2166_0040640 BN2166_0022720 BN2166_0022720 BN2166_0036580 BN2166_0036580 BN2166_0040240 BN2166_0040240 BN2166_0047400 BN2166_0047400 BN2166_0039440 BN2166_0039440 BN2166_0020770 BN2166_0020770 BN2166_0045950 BN2166_0045950 BN2166_0037390 BN2166_0037390 BN2166_0032610 BN2166_0032610 BN2166_0032580 BN2166_0032580 BN2166_0031660 BN2166_0031660 BN2166_0031510 BN2166_0031510 BN2166_0018570 BN2166_0018570 BN2166_0035640 BN2166_0035640 BN2166_0017520 BN2166_0017520 BN2166_0042650 BN2166_0042650 BN2166_0030660 BN2166_0030660 BN2166_0030610 BN2166_0030610 BN2166_0030630 BN2166_0030630 BN2166_0041650 BN2166_0041650 BN2166_0015970 BN2166_0015970 BN2166_0029630 BN2166_0029630 BN2166_0032990 BN2166_0032990 BN2166_0028160 BN2166_0028160 BN2166_0028330 BN2166_0028330 BN2166_0028130 BN2166_0028130 BN2166_0027730 BN2166_0027730 BN2166_0039050 BN2166_0039050 BN2166_0026630 BN2166_0026630 BN2166_0012570 BN2166_0012570 BN2166_0011870 BN2166_0011870 BN2166_0028340 BN2166_0028340 BN2166_0010420 BN2166_0010420 BN2166_0024380 BN2166_0024380 BN2166_0010270 BN2166_0010270 BN2166_0024180 BN2166_0024180 BN2166_0035600 BN2166_0035600 BN2166_0023410 BN2166_0023410 BN2166_0022930 BN2166_0022930 BN2166_0022210 BN2166_0022210 BN2166_0033650 BN2166_0033650 BN2166_0021260 BN2166_0021260 BN2166_0024390 BN2166_0024390 BN2166_0006320 BN2166_0006320 BN2166_0023890 BN2166_0023890 BN2166_0020680 BN2166_0020680 BN2166_0031300 BN2166_0031300 BN2166_0023090 BN2166_0023090 BN2166_0005620 BN2166_0005620 BN2166_0022640 BN2166_0022640 BN2166_0018610 BN2166_0018610 BN2166_0004570 BN2166_0004570 BN2166_0018210 BN2166_0018210 BN2166_0004120 BN2166_0004120 BN2166_0002170 BN2166_0002170 BN2166_0073200 BN2166_0073200 BN2166_0001600 BN2166_0001600 BN2166_0048390 BN2166_0048390 BN2166_0037600 BN2166_0037600 BN2166_0046550 BN2166_0046550 BN2166_0009970 BN2166_0009970 BN2166_0000750 BN2166_0000750 BN2166_0002350 BN2166_0002350 BN2166_0002500 BN2166_0002500 BN2166_0002550 BN2166_0002550 BN2166_0005150 BN2166_0005150 BN2166_0005200 BN2166_0005200 BN2166_0005250 BN2166_0005250 BN2166_0008200 BN2166_0008200 BN2166_0008900 BN2166_0008900 BN2166_0009200 BN2166_0009200 BN2166_0000490 BN2166_0000490 BN2166_0001490 BN2166_0001490 BN2166_0003390 BN2166_0003390 BN2166_0003640 BN2166_0003640 BN2166_0000260 BN2166_0000260 BN2166_0012700 BN2166_0012700 BN2166_0000610 BN2166_0000610 BN2166_0004490 BN2166_0004490 BN2166_0012900 BN2166_0012900 BN2166_0013500 BN2166_0013500 BN2166_0005040 BN2166_0005040 BN2166_0014450 BN2166_0014450 BN2166_0005890 BN2166_0005890 BN2166_0002310 BN2166_0002310 BN2166_0007140 BN2166_0007140 BN2166_0003910 BN2166_0003910 BN2166_0007690 BN2166_0007690 BN2166_0008190 BN2166_0008190 BN2166_0008540 BN2166_0008540 BN2166_0005410 BN2166_0005410 BN2166_0017750 BN2166_0017750 BN2166_0009240 BN2166_0009240 BN2166_0009690 BN2166_0009690 BN2166_0008380 BN2166_0008380 BN2166_0011190 BN2166_0011190 BN2166_0009130 BN2166_0009130 BN2166_0012140 BN2166_0012140 BN2166_0010080 BN2166_0010080 BN2166_0009410 BN2166_0009410 BN2166_0013090 BN2166_0013090 BN2166_0011180 BN2166_0011180 BN2166_0010810 BN2166_0010810 BN2166_0012080 BN2166_0012080 BN2166_0014640 BN2166_0014640 BN2166_0024100 BN2166_0024100 BN2166_0014180 BN2166_0014180 BN2166_0016440 BN2166_0016440 BN2166_0016890 BN2166_0016890 BN2166_0026100 BN2166_0026100 BN2166_0014360 BN2166_0014360 BN2166_0016730 BN2166_0016730 BN2166_0019740 BN2166_0019740 BN2166_0017230 BN2166_0017230 BN2166_0020240 BN2166_0020240 BN2166_0002820 BN2166_0002820 BN2166_0020340 BN2166_0020340 BN2166_0018080 BN2166_0018080 BN2166_0017610 BN2166_0017610
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0047540Uncharacterized protein. (1216 aa)
BN2166_0075320FGENESH: predicted gene_29.1 protein. (1456 aa)
BN2166_0075020FGENESH: predicted gene_24.1 protein. (390 aa)
BN2166_0074820FGENESH: predicted gene_20.5 protein. (1374 aa)
BN2166_0072770Rad51 domain-containing protein. (361 aa)
BN2166_0068670DNA ligase. (872 aa)
BN2166_0068020annotation not available (345 aa)
BN2166_0065470BY PROTMAP: gi|342319021|gb|EGU10973.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (1208 aa)
BN2166_0064920AAA_23 domain-containing protein. (197 aa)
BN2166_0064520BY PROTMAP: gi|472585507|gb|EMS23058.1| bloom syndrome protein [Rhodosporidium toruloides NP11]. (1529 aa)
BN2166_0063270Uracil-DNA glycosylase-like protein. (370 aa)
BN2166_0075110FGENESH: predicted gene_25.1 protein. (987 aa)
BN2166_0074810FGENESH: predicted gene_20.4 protein. (781 aa)
BN2166_0074560DNA-directed RNA polymerase II. (130 aa)
BN2166_0074460annotation not available (661 aa)
BN2166_0060970annotation not available (561 aa)
BN2166_0060170annotation not available (197 aa)
BN2166_0072510FGENESH: predicted gene_17.109 protein. (1594 aa)
BN2166_0059220UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (123 aa)
BN2166_0071760BY PROTMAP: gi|342320802|gb|EGU12741.1| DNA polymerase lambda [Rhodotorula glutinis ATCC 204091]. (1020 aa)
BN2166_0073480annotation not available (846 aa)
BN2166_0074290Cytidine deaminase-like protein. (216 aa)
BN2166_0070430Protein kinase-like domain-containing protein. (533 aa)
BN2166_0067860Uncharacterized protein. (696 aa)
BN2166_0067660annotation not available (813 aa)
BN2166_0070030annotation not available (1384 aa)
BN2166_0067410FGENESH: predicted gene_15.22 protein. (183 aa)
BN2166_0054770ERCC4 domain-containing protein. (1060 aa)
BN2166_0067780FGENESH: predicted gene_15.59 protein. (540 aa)
BN2166_0067080annotation not available (871 aa)
BN2166_0064910FGENESH: predicted gene_14.41 protein. (914 aa)
UNG1Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. (351 aa)
BN2166_0063210Uracil-DNA glycosylase-like protein. (413 aa)
BN2166_0074350FGENESH: predicted gene_18.86 protein. (726 aa)
BN2166_0067240BY PROTMAP: gi|342321083|gb|EGU13020.1| Alternative cyclin Pcl1 [Rhodotorula glutinis ATCC 204091]. (428 aa)
BN2166_0048770WD_REPEATS_REGION domain-containing protein. (1291 aa)
BN2166_0072000BY PROTMAP: gi|342320789|gb|EGU12728.1| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091]. (1449 aa)
BN2166_007170026S proteasome subunit RPN7-domain containing protein. (508 aa)
BN2166_0047320BY PROTMAP: gi|342319987|gb|EGU11932.1| putative Endonuclease [Rhodotorula glutinis ATCC 204091]. (1073 aa)
BN2166_0064690BY PROTMAP: gi|342319058|gb|EGU11010.1| putative RAD57 protein [Rhodotorula glutinis ATCC 204091]. (556 aa)
BN2166_0063990Protein kinase-like domain-containing protein. (763 aa)
BN2166_0058860Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (842 aa)
BN2166_0063890annotation not available (778 aa)
BN2166_0045720Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (743 aa)
BN2166_0063590Belongs to the cyclin family. (472 aa)
BN2166_0060380BY PROTMAP: gi|472586258|gb|EMS23786.1| 3'-5' exonuclease [Rhodosporidium toruloides NP11]. (335 aa)
BN2166_0062490FGENESH: predicted gene_13.79 protein. (281 aa)
BN2166_0062440annotation not available (313 aa)
BN2166_0059430annotation not available (762 aa)
BN2166_0061590BY PROTMAP: gi|472586134|gb|EMS23662.1| nucleus protein [Rhodosporidium toruloides NP11]. (198 aa)
BN2166_0066300annotation not available (1334 aa)
BN2166_0066250annotation not available (1102 aa)
BN2166_0058590BY PROTMAP: gi|647398513|emb|CDR42529.1| RHTO0S07e00518g1_1 [Rhodosporidium toruloides]. (562 aa)
BN2166_0065250Uncharacterized protein. (259 aa)
BN2166_0057990Putative Serine/threonine protein kinase FSK. (750 aa)
BN2166_0040470BY PROTMAP: gi|647401525|emb|CDR47825.1| RHTO0S15e02454g1_1 [Rhodosporidium toruloides]. (1530 aa)
BN2166_0064900Uncharacterized protein. (189 aa)
BN2166_0052460Cir_N domain-containing protein. (402 aa)
BN2166_0051960BY PROTMAP: gi|342319269|gb|EGU11219.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (1144 aa)
BN2166_0054480annotation not available (875 aa)
BN2166_0054230PCI domain-containing protein. (516 aa)
BN2166_0054030Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (686 aa)
BN2166_0055740FGENESH: predicted gene_11.70 protein. (183 aa)
BN2166_0062550TFIIH subunit Tfb4/p34. (347 aa)
BN2166_0052980annotation not available (730 aa)
BN2166_0036720FGENESH: predicted gene_7.57 protein. (327 aa)
BN2166_0036420Belongs to the peptidase C19 family. (1112 aa)
BN2166_0061100BY PROTMAP: gi|814543146|emb|CEQ39523.1| SPOSA6832_01050 [Sporidiobolus salmonicolor]. (389 aa)
BN2166_0060450annotation not available (1036 aa)
BN2166_0047260FGENESH: predicted gene_9.72 protein. (1762 aa)
BN2166_0052190DNA mismatch repair protein MSH2; Component of the post-replicative DNA mismatch repair system (MMR). (986 aa)
BN2166_0046860Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (388 aa)
BN2166_0034820BY PROTMAP: gi|342319729|gb|EGU11676.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (3827 aa)
BN2166_0033270annotation not available (424 aa)
BN2166_0050590BY PROTMAP: gi|647403136|emb|CDR49294.1| RHTO0S25e00650g1_1 [Rhodosporidium toruloides]; Belongs to the PI3/PI4-kinase family. (2634 aa)
BN2166_0033120BY PROTMAP: gi|647399978|emb|CDR45008.1| RHTO0S10e04126g1_1 [Rhodosporidium toruloides]. (210 aa)
BN2166_0046210Belongs to the protein kinase superfamily. (354 aa)
BN2166_0057500PCI domain-containing protein. (1445 aa)
BN2166_0045460Sec63 Brl domain-domain containing protein. (1812 aa)
BN2166_0031420DNA_MISMATCH_REPAIR_2 domain-containing protein. (1020 aa)
BN2166_0045780annotation not available (410 aa)
BN2166_0043710DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (402 aa)
BN2166_0030670DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. (503 aa)
BN2166_0044630BY PROTMAP: gi|342321525|gb|EGU13458.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (1235 aa)
BN2166_0042310FGENESH: predicted gene_8.86 protein. (1243 aa)
BN2166_0043930BY PROTMAP: gi|342321555|gb|EGU13488.1| Hydrophilic protein [Rhodotorula glutinis ATCC 204091]. (370 aa)
BN2166_00416606-O-methylguanine DNA methyltransferase, DNA binding domain-domain containing protein. (231 aa)
BN2166_0029020Ubiquitin-related domain-containing protein. (154 aa)
BN2166_0053250annotation not available (389 aa)
BN2166_0046090Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. (798 aa)
BN2166_0027320Von Willebrand factor type A domain-domain containing protein. (905 aa)
BN2166_0026970Cytidine deaminase-like protein. (252 aa)
BN2166_0026870DNA-binding HORMA. (263 aa)
BN2166_0026670FGENESH: predicted gene_5.212 protein. (360 aa)
BN2166_0038760DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. (733 aa)
BN2166_0050150FGENESH: predicted gene_9.361 protein. (140 aa)
BN2166_0025470FGENESH: predicted gene_5.92 protein. (378 aa)
BN2166_0042140Putative DNA 3'-phosphatase Tpp1. (562 aa)
BN2166_0038730annotation not available (415 aa)
BN2166_0037810BY PROTMAP: gi|342320515|gb|EGU12455.1| glycosylase/lyase [Rhodotorula glutinis ATCC 204091]. (491 aa)
BN2166_0023220Spliceosome complex protein. (1017 aa)
BN2166_0036510annotation not available (1160 aa)
BN2166_0040640FGENESH: predicted gene_7.449 protein. (534 aa)
BN2166_0022720FGENESH: predicted gene_4.48 protein. (231 aa)
BN2166_0036580Chromosome segregation in meiosis protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family. (363 aa)
BN2166_0040240BY PROTMAP: gi|342320419|gb|EGU12359.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (1583 aa)
BN2166_0047400annotation not available (893 aa)
BN2166_0039440annotation not available (268 aa)
BN2166_0020770Putative A/G-specific adenine DNA glycosylase. (666 aa)
BN2166_0045950Serine/threonine-protein kinase Tel1; Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR), ultraviolet light (UV), or DNA replication stalling, thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates histone H2A to form H2AS128ph (gamma-H2A) at sites of DNA damage, involved in the regulation of DNA damage response mechanism. Required for the control of telomere length and genome stability; Belongs to the PI3/PI4-kinase family. ATM subfamily. (3051 aa)
BN2166_0037390DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1189 aa)
BN2166_0032610Belongs to the cullin family. (803 aa)
BN2166_0032580Replication factor C subunit 1. (887 aa)
BN2166_0031660DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1766 aa)
BN2166_0031510BY PROTMAP: gi|342319597|gb|EGU11544.1| Cytosine deaminase [Rhodotorula glutinis ATCC 204091]. (165 aa)
BN2166_0018570Uncharacterized protein. (230 aa)
BN2166_0035640annotation not available (807 aa)
BN2166_0017520BY PROTMAP: gi|472583956|gb|EMS21572.1| DNA ligase [Rhodosporidium toruloides NP11]. (545 aa)
BN2166_0042650Timeless protein-domain containing protein. (1214 aa)
BN2166_0030660DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. (485 aa)
BN2166_0030610DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1254 aa)
BN2166_0030630Uncharacterized protein. (148 aa)
BN2166_0041650annotation not available (489 aa)
BN2166_0015970DUF1767 domain-containing protein. (430 aa)
BN2166_0029630annotation not available (1156 aa)
BN2166_0032990annotation not available (674 aa)
BN2166_0028160Replication factor C subunit 4. (438 aa)
BN2166_0028330FGENESH: predicted gene_5.378 protein. (732 aa)
BN2166_0028130FGENESH: predicted gene_5.358 protein. (325 aa)
BN2166_0027730Putative DNA helicase INO80. (1591 aa)
BN2166_0039050Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (620 aa)
BN2166_0026630annotation not available (351 aa)
BN2166_0012570annotation not available (410 aa)
BN2166_0011870annotation not available (1800 aa)
BN2166_0028340annotation not available (925 aa)
BN2166_0010420BY PROTMAP: gi|342319914|gb|EGU11859.1| Membrane protein [Rhodotorula glutinis ATCC 204091]. (1070 aa)
BN2166_0024380FGENESH: predicted gene_4.214 protein. (2249 aa)
BN2166_0010270FGENESH: predicted gene_2.196 protein. (1656 aa)
BN2166_0024180annotation not available (904 aa)
BN2166_0035600DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (1012 aa)
BN2166_0023410Ubiquitin carboxyl-terminal hydrolase. (974 aa)
BN2166_0022930annotation not available (123 aa)
BN2166_0022210FGENESH: predicted gene_3.672 protein. (781 aa)
BN2166_0033650PCI domain-containing protein. (368 aa)
BN2166_0021260Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (570 aa)
BN2166_0024390FGENESH: predicted gene_4.215 protein. (2233 aa)
BN2166_0006320Rad51-associated protein Brh2. (1137 aa)
BN2166_0023890annotation not available (374 aa)
BN2166_0020680FGENESH: predicted gene_3.519 protein. (1459 aa)
BN2166_0031300Belongs to the actin family. (794 aa)
BN2166_0023090BY PROTMAP: gi|342319803|gb|EGU11749.1| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091]. (564 aa)
BN2166_0005620P-loop containing nucleoside triphosphate hydrolase protein. (841 aa)
BN2166_0022640DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (123 aa)
BN2166_0018610annotation not available (709 aa)
BN2166_0004570DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. (345 aa)
BN2166_0018210Histone H2B; Belongs to the histone H2B family. (125 aa)
BN2166_0004120annotation not available (1050 aa)
BN2166_0002170DNA replication factor A subunit Ssb3. (108 aa)
BN2166_0073200Serine/threonine-protein phosphatase. (306 aa)
BN2166_0001600Pre-mRNA-splicing factor ISY1. (308 aa)
BN2166_0048390FGENESH: predicted gene_9.185 protein. (101 aa)
BN2166_0037600Nuclear transport factor 2. (124 aa)
BN2166_0046550RHTO0S21e02696g1_1. (177 aa)
BN2166_0009970Histone H2B; Belongs to the histone H2B family. (144 aa)
BN2166_0000750Putative COP9 signalosome complex subunit 2. (480 aa)
BN2166_0002350RNA-binding domain-containing protein. (139 aa)
BN2166_0002500BY PROTMAP: gi|342319348|gb|EGU11297.1| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091]. (652 aa)
BN2166_0002550HRDC-like protein. (105 aa)
BN2166_0005150annotation not available (663 aa)
BN2166_0005200annotation not available (1304 aa)
BN2166_0005250BY PROTMAP: gi|342320736|gb|EGU12675.1| DNA ligase [Rhodotorula glutinis ATCC 204091]. (946 aa)
BN2166_0008200annotation not available (390 aa)
BN2166_0008900XPC-binding domain-domain containing protein. (403 aa)
BN2166_0009200annotation not available (600 aa)
BN2166_0000490annotation not available (138 aa)
BN2166_0001490FGENESH: predicted gene_1.149 protein. (316 aa)
BN2166_0003390annotation not available (153 aa)
BN2166_0003640annotation not available (731 aa)
BN2166_0000260RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (467 aa)
BN2166_0012700DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. (613 aa)
BN2166_0000610Peptidyl-prolyl cis-trans isomerase. (374 aa)
BN2166_0004490FGENESH: predicted gene_1.449 protein. (187 aa)
BN2166_0012900DNA ligase. (1333 aa)
BN2166_0013500FGENESH: predicted gene_2.519 protein. (560 aa)
BN2166_0005040Uncharacterized protein. (150 aa)
BN2166_0014450FGENESH: predicted gene_2.614 protein. (372 aa)
BN2166_0005890BY PROTMAP: gi|647396226|emb|CDR38250.1| RHTO0S03e06766g1_1 [Rhodosporidium toruloides]; Belongs to the peptidase C19 family. (1037 aa)
BN2166_0002310DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (364 aa)
BN2166_0007140BY PROTMAP: gi|647394924|emb|CDR36159.1| RHTO0S01e15544g1_1 [Rhodosporidium toruloides]. (591 aa)
BN2166_0003910Ubiquitin carboxyl-terminal hydrolase; Belongs to the peptidase C19 family. (1438 aa)
BN2166_0007690FGENESH: predicted gene_1.769 protein. (1389 aa)
BN2166_0008190annotation not available (1088 aa)
BN2166_0008540FGENESH: predicted gene_2.23 protein. (1833 aa)
BN2166_0005410FGENESH: predicted gene_1.541 protein. (1044 aa)
BN2166_0017750FGENESH: predicted gene_3.226 protein. (324 aa)
BN2166_0009240Serine/threonine-protein phosphatase. (313 aa)
BN2166_0009690FGENESH: predicted gene_2.138 protein; Belongs to the peptidase C19 family. (1199 aa)
BN2166_0008380Putative DNA polymerase. (210 aa)
BN2166_0011190DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1245 aa)
BN2166_0009130Restriction endonuclease type II-like protein. (332 aa)
BN2166_0012140DNA polymerase. (1990 aa)
BN2166_0010080Uncharacterized protein. (459 aa)
BN2166_0009410FGENESH: predicted gene_2.110 protein. (325 aa)
BN2166_0013090FGENESH: predicted gene_2.478 protein. (388 aa)
BN2166_0011180BY PROTMAP: gi|342319958|gb|EGU11903.1| RAD51-like protein 2 ISS [Rhodotorula glutinis ATCC 204091]. (297 aa)
BN2166_0010810SNF2 family N-terminal domain-domain containing protein. (896 aa)
BN2166_0012080BY PROTMAP: gi|647394756|emb|CDR35990.1| RHTO0S01e11694g1_1 [Rhodosporidium toruloides]. (1189 aa)
BN2166_0014640Belongs to the peptidase C19 family. (1536 aa)
BN2166_0024100annotation not available (279 aa)
BN2166_0014180annotation not available (1032 aa)
BN2166_0016440RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (496 aa)
BN2166_0016890DNA polymerase subunit Cdc27. (418 aa)
BN2166_0026100Putative RFC3-DNA replication factor C, 40 kDa subunit. (357 aa)
BN2166_0014360BY PROTMAP: gi|647401247|emb|CDR47360.1| RHTO0S14e02542g1_1 [Rhodosporidium toruloides]. (348 aa)
BN2166_0016730FGENESH: predicted gene_3.124 protein. (789 aa)
BN2166_0019740Cyclin-like protein; Belongs to the cyclin family. (404 aa)
BN2166_0017230General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (451 aa)
BN2166_0020240annotation not available (633 aa)
BN2166_0002820P-loop containing nucleoside triphosphate hydrolase protein. (297 aa)
BN2166_0020340annotation not available (1209 aa)
BN2166_0018080Histone H2B; Belongs to the histone H2B family. (138 aa)
BN2166_0017610FGENESH: predicted gene_3.212 protein. (1777 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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