STRINGSTRING
BN2166_0042310 BN2166_0042310 BN2166_0006030 BN2166_0006030 BN2166_0015400 BN2166_0015400 BN2166_0003390 BN2166_0003390 BN2166_0005040 BN2166_0005040 BN2166_0004930 BN2166_0004930 BN2166_0005760 BN2166_0005760 BN2166_0006610 BN2166_0006610 BN2166_0009610 BN2166_0009610 BN2166_0011930 BN2166_0011930 BN2166_0024550 BN2166_0024550 BN2166_0017010 BN2166_0017010 BN2166_0031600 BN2166_0031600 BN2166_0023690 BN2166_0023690 BN2166_0022310 BN2166_0022310 BN2166_0035500 BN2166_0035500 BN2166_0034540 BN2166_0034540 BN2166_0016870 BN2166_0016870 BN2166_0042250 BN2166_0042250 BN2166_0018570 BN2166_0018570 BN2166_0044150 BN2166_0044150 BN2166_0043490 BN2166_0043490 BN2166_0041730 BN2166_0041730 BN2166_0029020 BN2166_0029020 BN2166_0048760 BN2166_0048760 BN2166_0036470 BN2166_0036470 BN2166_0049510 BN2166_0049510 BN2166_0051160 BN2166_0051160 BN2166_0053830 BN2166_0053830 BN2166_0056840 BN2166_0056840 BN2166_0066550 BN2166_0066550 MDM34 MDM34 BN2166_0070750 BN2166_0070750 BN2166_0063530 BN2166_0063530 BN2166_0074440 BN2166_0074440 BN2166_0069410 BN2166_0069410 BN2166_0061820 BN2166_0061820 BN2166_0071020 BN2166_0071020
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0042310FGENESH: predicted gene_8.86 protein. (1243 aa)
BN2166_0006030Serine/threonine-protein phosphatase. (306 aa)
BN2166_0015400WD40-repeat-containing domain protein. (377 aa)
BN2166_0003390annotation not available (153 aa)
BN2166_0005040Uncharacterized protein. (150 aa)
BN2166_0004930Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (173 aa)
BN2166_0005760annotation not available (374 aa)
BN2166_0006610Putative Ser/Thr protein kinase. (1393 aa)
BN2166_0009610Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2364 aa)
BN2166_0011930BY PROTMAP: gi|647394773|emb|CDR36007.1| RHTO0S01e12134g1_1 [Rhodosporidium toruloides]. (607 aa)
BN2166_0024550FGENESH: predicted gene_4.231 protein. (473 aa)
BN2166_0017010annotation not available (1034 aa)
BN2166_0031600FGENESH: predicted gene_6.82 protein. (689 aa)
BN2166_0023690FGENESH: predicted gene_4.145 protein. (1023 aa)
BN2166_0022310Uncharacterized protein. (1239 aa)
BN2166_0035500Camp-dependent protein kinase regulatory subunit. (551 aa)
BN2166_0034540Non-specific serine/threonine protein kinase. (815 aa)
BN2166_0016870Leucine-rich repeat-containing protein 40. (869 aa)
BN2166_0042250Translation factor GUF1, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (721 aa)
BN2166_0018570Uncharacterized protein. (230 aa)
BN2166_0044150annotation not available (1957 aa)
BN2166_0043490annotation not available (778 aa)
BN2166_0041730FGENESH: predicted gene_8.28 protein. (2122 aa)
BN2166_0029020Ubiquitin-related domain-containing protein. (154 aa)
BN2166_0048760annotation not available (472 aa)
BN2166_0036470Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. (859 aa)
BN2166_0049510Belongs to the protein kinase superfamily. (493 aa)
BN2166_0051160annotation not available (795 aa)
BN2166_0053830Stress-activated map kinase interacting protein 1 (SIN1)-domain containing protein. (953 aa)
BN2166_0056840Uncharacterized protein. (1356 aa)
BN2166_0066550FGENESH: predicted gene_14.205 protein; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (1715 aa)
MDM34Mitochondrial distribution and morphology protein 34; Component of the ERMES/MDM complex, which serves as a molecular tether to connect the endoplasmic reticulum (ER) and mitochondria. Components of this complex are involved in the control of mitochondrial shape and protein biogenesis, and function in nonvesicular lipid trafficking between the ER and mitochondria. MDM34 is required for the interaction of the ER-resident membrane protein MMM1 and the outer mitochondrial membrane-resident beta-barrel protein MDM10. (794 aa)
BN2166_0070750Non-specific serine/threonine protein kinase. (546 aa)
BN2166_0063530OTU domain-containing protein. (420 aa)
BN2166_0074440annotation not available (1033 aa)
BN2166_0069410FGENESH: predicted gene_15.222 protein. (950 aa)
BN2166_0061820Serine/threonine-protein kinase ksg1. (1148 aa)
BN2166_0071020annotation not available (749 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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