9 items (Rhodotorula toruloides) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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Predicted Interactions

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Your Input:
	BN2166_0054080	Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
	BN2166_0003390	annotation not available (153 aa)
	BN2166_0004490	FGENESH: predicted gene_1.449 protein. (187 aa)
	BN2166_0005040	Uncharacterized protein. (150 aa)
	BN2166_0008270	annotation not available (138 aa)
	BN2166_0014670	annotation not available (652 aa)
	BN2166_0018570	Uncharacterized protein. (230 aa)
	BN2166_0029020	Ubiquitin-related domain-containing protein. (154 aa)
	BN2166_0042310	FGENESH: predicted gene_8.86 protein. (1243 aa)

Your Current Organism:

Rhodotorula toruloides

NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN2166_0003390	BN2166_0004490	A0A0K3C6J0	A0A0K3C6W9	annotation not available	FGENESH: predicted gene_1.449 protein.	0.689
BN2166_0003390	BN2166_0008270	A0A0K3C6J0	A0A0K3CCS3	annotation not available	annotation not available	0.973
BN2166_0003390	BN2166_0018570	A0A0K3C6J0	A0A0K3CFL1	annotation not available	Uncharacterized protein.	0.982
BN2166_0003390	BN2166_0029020	A0A0K3C6J0	A0A0K3CII4	annotation not available	Ubiquitin-related domain-containing protein.	0.938
BN2166_0003390	BN2166_0042310	A0A0K3C6J0	A0A0K3CIR4	annotation not available	FGENESH: predicted gene_8.86 protein.	0.937
BN2166_0003390	BN2166_0054080	A0A0K3C6J0	A0A061AJT8	annotation not available	Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family.	0.990
BN2166_0004490	BN2166_0003390	A0A0K3C6W9	A0A0K3C6J0	FGENESH: predicted gene_1.449 protein.	annotation not available	0.689
BN2166_0004490	BN2166_0005040	A0A0K3C6W9	A0A0K3C739	FGENESH: predicted gene_1.449 protein.	Uncharacterized protein.	0.689
BN2166_0004490	BN2166_0008270	A0A0K3C6W9	A0A0K3CCS3	FGENESH: predicted gene_1.449 protein.	annotation not available	0.745
BN2166_0004490	BN2166_0014670	A0A0K3C6W9	A0A0K3CEI4	FGENESH: predicted gene_1.449 protein.	annotation not available	0.657
BN2166_0004490	BN2166_0018570	A0A0K3C6W9	A0A0K3CFL1	FGENESH: predicted gene_1.449 protein.	Uncharacterized protein.	0.633
BN2166_0004490	BN2166_0029020	A0A0K3C6W9	A0A0K3CII4	FGENESH: predicted gene_1.449 protein.	Ubiquitin-related domain-containing protein.	0.633
BN2166_0004490	BN2166_0042310	A0A0K3C6W9	A0A0K3CIR4	FGENESH: predicted gene_1.449 protein.	FGENESH: predicted gene_8.86 protein.	0.633
BN2166_0004490	BN2166_0054080	A0A0K3C6W9	A0A061AJT8	FGENESH: predicted gene_1.449 protein.	Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family.	0.686
BN2166_0005040	BN2166_0004490	A0A0K3C739	A0A0K3C6W9	Uncharacterized protein.	FGENESH: predicted gene_1.449 protein.	0.689
BN2166_0005040	BN2166_0008270	A0A0K3C739	A0A0K3CCS3	Uncharacterized protein.	annotation not available	0.944
BN2166_0005040	BN2166_0018570	A0A0K3C739	A0A0K3CFL1	Uncharacterized protein.	Uncharacterized protein.	0.773
BN2166_0005040	BN2166_0029020	A0A0K3C739	A0A0K3CII4	Uncharacterized protein.	Ubiquitin-related domain-containing protein.	0.773
BN2166_0005040	BN2166_0042310	A0A0K3C739	A0A0K3CIR4	Uncharacterized protein.	FGENESH: predicted gene_8.86 protein.	0.773
BN2166_0005040	BN2166_0054080	A0A0K3C739	A0A061AJT8	Uncharacterized protein.	Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family.	0.823

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