22 items (Rhodotorula toruloides) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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Predicted Interactions

gene neighborhood

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Others

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Your Input:
	BN2166_0019630	FGENESH: predicted gene_3.414 protein. (482 aa)
	BN2166_0019210	BY PROTMAP: gi\|342320098\|gb\|EGU12041.1\| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (480 aa)
	BN2166_0026380	FGENESH: predicted gene_5.183 protein; Belongs to the small GTPase superfamily. Arf family. (236 aa)
	BN2166_0030910	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. (461 aa)
	BN2166_0018570	Uncharacterized protein. (230 aa)
	BN2166_0019320	BY PROTMAP: gi\|342320101\|gb\|EGU12044.1\| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (756 aa)
	BN2166_0019620	Uncharacterized protein. (552 aa)
	BN2166_0020320	FGENESH: predicted gene_3.483 protein. (432 aa)
	BN2166_0029020	Ubiquitin-related domain-containing protein. (154 aa)
	BN2166_0042310	FGENESH: predicted gene_8.86 protein. (1243 aa)
	BN2166_0044560	BY PROTMAP: gi\|342321529\|gb\|EGU13462.1\| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (415 aa)
	BN2166_0055710	FGENESH: predicted gene_11.67 protein. (495 aa)
	BN2166_0044570	BY PROTMAP: gi\|342321528\|gb\|EGU13461.1\| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (371 aa)
	BN2166_0054520	Acyl-protein thioesterase 1. (229 aa)
	BN2166_0074610	BY PROTMAP: gi\|647401091\|emb\|CDR47060.1\| RHTO0S13e05446g1_1 [Rhodosporidium toruloides]. (336 aa)
	BN2166_0068920	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (538 aa)
	BN2166_0016880	FGENESH: predicted gene_3.139 protein. (274 aa)
	BN2166_0022150	Phospholipase/Carboxylesterase-domain containing protein. (288 aa)
	BN2166_0009630	annotation not available (367 aa)
	BN2166_0019100	annotation not available (460 aa)
	BN2166_0005040	Uncharacterized protein. (150 aa)
	BN2166_0003390	annotation not available (153 aa)

Your Current Organism:

Rhodotorula toruloides

NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN2166_0003390	BN2166_0018570	A0A0K3C6J0	A0A0K3CFL1	annotation not available	Uncharacterized protein.	0.982
BN2166_0003390	BN2166_0029020	A0A0K3C6J0	A0A0K3CII4	annotation not available	Ubiquitin-related domain-containing protein.	0.938
BN2166_0003390	BN2166_0042310	A0A0K3C6J0	A0A0K3CIR4	annotation not available	FGENESH: predicted gene_8.86 protein.	0.937
BN2166_0005040	BN2166_0018570	A0A0K3C739	A0A0K3CFL1	Uncharacterized protein.	Uncharacterized protein.	0.773
BN2166_0005040	BN2166_0029020	A0A0K3C739	A0A0K3CII4	Uncharacterized protein.	Ubiquitin-related domain-containing protein.	0.773
BN2166_0005040	BN2166_0042310	A0A0K3C739	A0A0K3CIR4	Uncharacterized protein.	FGENESH: predicted gene_8.86 protein.	0.773
BN2166_0009630	BN2166_0030910	A0A0K3C8X1	A0A0K3CFC8	annotation not available	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	0.996
BN2166_0009630	BN2166_0074610	A0A0K3C8X1	A0A0K3CSU1	annotation not available	BY PROTMAP: gi\|647401091\|emb\|CDR47060.1\| RHTO0S13e05446g1_1 [Rhodosporidium toruloides].	0.893
BN2166_0018570	BN2166_0003390	A0A0K3CFL1	A0A0K3C6J0	Uncharacterized protein.	annotation not available	0.982
BN2166_0018570	BN2166_0005040	A0A0K3CFL1	A0A0K3C739	Uncharacterized protein.	Uncharacterized protein.	0.773
BN2166_0029020	BN2166_0003390	A0A0K3CII4	A0A0K3C6J0	Ubiquitin-related domain-containing protein.	annotation not available	0.938
BN2166_0029020	BN2166_0005040	A0A0K3CII4	A0A0K3C739	Ubiquitin-related domain-containing protein.	Uncharacterized protein.	0.773
BN2166_0030910	BN2166_0009630	A0A0K3CFC8	A0A0K3C8X1	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	annotation not available	0.996
BN2166_0030910	BN2166_0074610	A0A0K3CFC8	A0A0K3CSU1	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	BY PROTMAP: gi\|647401091\|emb\|CDR47060.1\| RHTO0S13e05446g1_1 [Rhodosporidium toruloides].	0.926
BN2166_0042310	BN2166_0003390	A0A0K3CIR4	A0A0K3C6J0	FGENESH: predicted gene_8.86 protein.	annotation not available	0.937
BN2166_0042310	BN2166_0005040	A0A0K3CIR4	A0A0K3C739	FGENESH: predicted gene_8.86 protein.	Uncharacterized protein.	0.773
BN2166_0074610	BN2166_0009630	A0A0K3CSU1	A0A0K3C8X1	BY PROTMAP: gi\|647401091\|emb\|CDR47060.1\| RHTO0S13e05446g1_1 [Rhodosporidium toruloides].	annotation not available	0.893
BN2166_0074610	BN2166_0030910	A0A0K3CSU1	A0A0K3CFC8	BY PROTMAP: gi\|647401091\|emb\|CDR47060.1\| RHTO0S13e05446g1_1 [Rhodosporidium toruloides].	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	0.926

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