10 items (Rhodotorula toruloides) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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Predicted Interactions

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Your Input:
	BN2166_0042310	FGENESH: predicted gene_8.86 protein. (1243 aa)
	BN2166_0022170	annotation not available (891 aa)
	BN2166_0045950	Serine/threonine-protein kinase Tel1; Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR), ultraviolet light (UV), or DNA replication stalling, thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates histone H2A to form H2AS128ph (gamma-H2A) at sites of DNA damage, involved in the regulation of DNA damage response mechanism. Required for the control of telomere length and genome stability; Belongs to the PI3/PI4-kinase family. ATM subfamily. (3051 aa)
	BN2166_0018570	Uncharacterized protein. (230 aa)
	BN2166_0005040	Uncharacterized protein. (150 aa)
	BN2166_0003390	annotation not available (153 aa)
	BN2166_0001640	USP domain-containing protein; Belongs to the peptidase C19 family. (640 aa)
	BN2166_0057470	Peroxisomal targeting signal receptor. (694 aa)
	BN2166_0043070	Uncharacterized protein. (888 aa)
	BN2166_0029020	Ubiquitin-related domain-containing protein. (154 aa)

Your Current Organism:

Rhodotorula toruloides

NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN2166_0001640	BN2166_0003390	A0A0K3C645	A0A0K3C6J0	USP domain-containing protein; Belongs to the peptidase C19 family.	annotation not available	0.968
BN2166_0001640	BN2166_0005040	A0A0K3C645	A0A0K3C739	USP domain-containing protein; Belongs to the peptidase C19 family.	Uncharacterized protein.	0.897
BN2166_0001640	BN2166_0018570	A0A0K3C645	A0A0K3CFL1	USP domain-containing protein; Belongs to the peptidase C19 family.	Uncharacterized protein.	0.888
BN2166_0001640	BN2166_0022170	A0A0K3C645	A0A0K3CGR8	USP domain-containing protein; Belongs to the peptidase C19 family.	annotation not available	0.639
BN2166_0001640	BN2166_0029020	A0A0K3C645	A0A0K3CII4	USP domain-containing protein; Belongs to the peptidase C19 family.	Ubiquitin-related domain-containing protein.	0.888
BN2166_0001640	BN2166_0042310	A0A0K3C645	A0A0K3CIR4	USP domain-containing protein; Belongs to the peptidase C19 family.	FGENESH: predicted gene_8.86 protein.	0.888
BN2166_0001640	BN2166_0057470	A0A0K3C645	A0A0K3CRU3	USP domain-containing protein; Belongs to the peptidase C19 family.	Peroxisomal targeting signal receptor.	0.639
BN2166_0003390	BN2166_0001640	A0A0K3C6J0	A0A0K3C645	annotation not available	USP domain-containing protein; Belongs to the peptidase C19 family.	0.968
BN2166_0003390	BN2166_0018570	A0A0K3C6J0	A0A0K3CFL1	annotation not available	Uncharacterized protein.	0.982
BN2166_0003390	BN2166_0022170	A0A0K3C6J0	A0A0K3CGR8	annotation not available	annotation not available	0.682
BN2166_0003390	BN2166_0029020	A0A0K3C6J0	A0A0K3CII4	annotation not available	Ubiquitin-related domain-containing protein.	0.938
BN2166_0003390	BN2166_0042310	A0A0K3C6J0	A0A0K3CIR4	annotation not available	FGENESH: predicted gene_8.86 protein.	0.937
BN2166_0003390	BN2166_0043070	A0A0K3C6J0	A0A0K3CMQ8	annotation not available	Uncharacterized protein.	0.833
BN2166_0003390	BN2166_0057470	A0A0K3C6J0	A0A0K3CRU3	annotation not available	Peroxisomal targeting signal receptor.	0.682
BN2166_0005040	BN2166_0001640	A0A0K3C739	A0A0K3C645	Uncharacterized protein.	USP domain-containing protein; Belongs to the peptidase C19 family.	0.897
BN2166_0005040	BN2166_0018570	A0A0K3C739	A0A0K3CFL1	Uncharacterized protein.	Uncharacterized protein.	0.773
BN2166_0005040	BN2166_0022170	A0A0K3C739	A0A0K3CGR8	Uncharacterized protein.	annotation not available	0.673
BN2166_0005040	BN2166_0029020	A0A0K3C739	A0A0K3CII4	Uncharacterized protein.	Ubiquitin-related domain-containing protein.	0.773
BN2166_0005040	BN2166_0042310	A0A0K3C739	A0A0K3CIR4	Uncharacterized protein.	FGENESH: predicted gene_8.86 protein.	0.773
BN2166_0005040	BN2166_0043070	A0A0K3C739	A0A0K3CMQ8	Uncharacterized protein.	Uncharacterized protein.	0.833

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