STRINGSTRING
BN2166_0028790 BN2166_0028790 BN2166_0027880 BN2166_0027880 BN2166_0028630 BN2166_0028630 BN2166_0032340 BN2166_0032340 BN2166_0030180 BN2166_0030180 BN2166_0016820 BN2166_0016820 BN2166_0043100 BN2166_0043100 BN2166_0018570 BN2166_0018570 BN2166_0033080 BN2166_0033080 BN2166_0038040 BN2166_0038040 BN2166_0022270 BN2166_0022270 BN2166_0039660 BN2166_0039660 BN2166_0052050 BN2166_0052050 BN2166_0024960 BN2166_0024960 BN2166_0027290 BN2166_0027290 BN2166_0023310 BN2166_0023310 BN2166_0022260 BN2166_0022260 BN2166_0007120 BN2166_0007120 BN2166_0005620 BN2166_0005620 BN2166_0019980 BN2166_0019980 BN2166_0004620 BN2166_0004620 BN2166_0003120 BN2166_0003120 BN2166_0017780 BN2166_0017780 BN2166_0028650 BN2166_0028650 BN2166_0027750 BN2166_0027750 BN2166_0015460 BN2166_0015460 BN2166_0015580 BN2166_0015580 BN2166_0022250 BN2166_0022250 BN2166_0010980 BN2166_0010980 BN2166_0009410 BN2166_0009410 BN2166_0012940 BN2166_0012940 BN2166_0004910 BN2166_0004910 BN2166_0013750 BN2166_0013750 BN2166_0005040 BN2166_0005040 BN2166_0003840 BN2166_0003840 BN2166_0003390 BN2166_0003390 BN2166_0009200 BN2166_0009200 BN2166_0069490 BN2166_0069490 BN2166_0015520 BN2166_0015520 BN2166_0048390 BN2166_0048390 BN2166_0029020 BN2166_0029020 BN2166_0043380 BN2166_0043380 BN2166_0042310 BN2166_0042310 BN2166_0044330 BN2166_0044330 BN2166_0055050 BN2166_0055050 BN2166_0030620 BN2166_0030620 BN2166_0031670 BN2166_0031670 BN2166_0033070 BN2166_0033070 BN2166_0048030 BN2166_0048030 BN2166_0052090 BN2166_0052090 BN2166_0037770 BN2166_0037770 BN2166_0061390 BN2166_0061390 BN2166_0069450 BN2166_0069450 BN2166_0065340 BN2166_0065340 BN2166_0060310 BN2166_0060310 BN2166_0051070 BN2166_0051070 BN2166_0067980 BN2166_0067980 BN2166_0070730 BN2166_0070730 BN2166_0074490 BN2166_0074490 BN2166_0073480 BN2166_0073480 BN2166_0063870 BN2166_0063870
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0028790SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family. (309 aa)
BN2166_0027880NPL4 family-domain containing protein. (745 aa)
BN2166_0028630WD_REPEATS_REGION domain-containing protein. (1212 aa)
BN2166_0032340Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (252 aa)
BN2166_0030180Thioredoxin family protein. (670 aa)
BN2166_0016820Thioredoxin-like fold. (241 aa)
BN2166_0043100FGENESH: predicted gene_8.165 protein. (1480 aa)
BN2166_0018570Uncharacterized protein. (230 aa)
BN2166_0033080Uncharacterized protein. (697 aa)
BN2166_0038040BY PROTMAP: gi|751835684|emb|CEL54483.1| catalase [Rhizoctonia solani AG-1 IB]. (596 aa)
BN2166_0022270annotation not available (93 aa)
BN2166_0039660FGENESH: predicted gene_7.351 protein. (679 aa)
BN2166_0052050FGENESH: predicted gene_10.42 protein. (146 aa)
BN2166_0024960Uncharacterized protein. (735 aa)
BN2166_0027290SCO1/SenC-domain containing protein. (280 aa)
BN2166_0023310annotation not available (150 aa)
BN2166_0022260Cytochrome c oxidase subunit 2; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1. (188 aa)
BN2166_0007120Cytochrome c oxidase polypeptide IV. (150 aa)
BN2166_0005620P-loop containing nucleoside triphosphate hydrolase protein. (841 aa)
BN2166_0019980Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. (151 aa)
BN2166_0004620annotation not available (1487 aa)
BN2166_0003120Cytochrome c oxidase assembly protein COX11. (277 aa)
BN2166_0017780FGENESH: predicted gene_3.229 protein; Belongs to the cytochrome c oxidase subunit 6A family. (143 aa)
BN2166_0028650WD40-repeat-containing domain protein. (772 aa)
BN2166_0027750Sulfiredoxin. (160 aa)
BN2166_0015460Peroxiredoxin. (225 aa)
BN2166_0015580Thioredoxin. (109 aa)
BN2166_0022250Cytochrome c oxidase subunit 3; Subunits I, II and III form the functional core of the enzyme complex. (164 aa)
BN2166_0010980Cytochrome oxidase c subunit VIb-domain containing protein. (99 aa)
BN2166_0009410FGENESH: predicted gene_2.110 protein. (325 aa)
BN2166_0012940DUF862 domain-containing protein. (322 aa)
BN2166_0004910Thioredoxin; Belongs to the thioredoxin family. (108 aa)
BN2166_0013750Uncharacterized protein. (218 aa)
BN2166_0005040Uncharacterized protein. (150 aa)
BN2166_0003840FGENESH: predicted gene_1.384 protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (107 aa)
BN2166_0003390annotation not available (153 aa)
BN2166_0009200annotation not available (600 aa)
BN2166_0069490Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport. (83 aa)
BN2166_0015520RHTO0S11e00144g1_1. (109 aa)
BN2166_0048390FGENESH: predicted gene_9.185 protein. (101 aa)
BN2166_0029020Ubiquitin-related domain-containing protein. (154 aa)
BN2166_0043380Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (217 aa)
BN2166_0042310FGENESH: predicted gene_8.86 protein. (1243 aa)
BN2166_0044330Thioredoxin; Belongs to the thioredoxin family. (130 aa)
BN2166_0055050FGENESH: predicted gene_11.1 protein. (430 aa)
BN2166_0030620FGENESH: predicted gene_5.607 protein. (665 aa)
BN2166_0031670BY PROTMAP: gi|342319608|gb|EGU11555.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (694 aa)
BN2166_0033070annotation not available (266 aa)
BN2166_0048030Valosin-containing protein; Belongs to the AAA ATPase family. (823 aa)
BN2166_0052090FGENESH: predicted gene_10.46 protein. (774 aa)
BN2166_0037770FGENESH: predicted gene_7.162 protein. (539 aa)
BN2166_0061390Signal peptide peptidase-domain containing protein. (405 aa)
BN2166_0069450annotation not available (739 aa)
BN2166_0065340BY PROTMAP: gi|472585593|gb|EMS23144.1| thioredoxin [Rhodosporidium toruloides NP11]. (103 aa)
BN2166_0060310Manganese superoxide dismutase. (343 aa)
BN2166_0051070BY PROTMAP: gi|647403069|emb|CDR49243.1| RHTO0S24e01640g1_1 [Rhodosporidium toruloides]. (598 aa)
BN2166_0067980RNA cap guanine-N2 methyltransferase-domain containing protein. (408 aa)
BN2166_0070730FGENESH: predicted gene_16.99 protein. (810 aa)
BN2166_0074490BY PROTMAP: gi|472584786|gb|EMS22361.1| dipeptidyl-peptidase III [Rhodosporidium toruloides NP11]. (790 aa)
BN2166_0073480annotation not available (846 aa)
BN2166_0063870COX5A-domain-containing protein. (134 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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