STRINGSTRING
BN2166_0042110 BN2166_0042110 BN2166_0012990 BN2166_0012990 BN2166_0031300 BN2166_0031300 BN2166_0027680 BN2166_0027680 BN2166_0016970 BN2166_0016970 BN2166_0046090 BN2166_0046090 BN2166_0055410 BN2166_0055410 BN2166_0055020 BN2166_0055020 BN2166_0060370 BN2166_0060370
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0042110BY PROTMAP: gi|342321625|gb|EGU13558.1| Actin binding protein [Rhodotorula glutinis ATCC 204091]; Belongs to the actin family. (911 aa)
BN2166_0012990Belongs to the actin family. (376 aa)
BN2166_0031300Belongs to the actin family. (794 aa)
BN2166_0027680annotation not available (370 aa)
BN2166_0016970Fungal-specific actin related protein; Belongs to the actin family. (642 aa)
BN2166_0046090Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. (798 aa)
BN2166_0055410Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament. (394 aa)
BN2166_0055020FGENESH: predicted gene_10.339 protein; Belongs to the actin family. (580 aa)
BN2166_0060370Uncharacterized protein; Belongs to the actin family. (948 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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