STRINGSTRING
BN2166_0003950 BN2166_0003950 BN2166_0002340 BN2166_0002340 BN2166_0005090 BN2166_0005090 BN2166_0005340 BN2166_0005340 BN2166_0014650 BN2166_0014650 BN2166_0006790 BN2166_0006790 BN2166_0020300 BN2166_0020300 BN2166_0011690 BN2166_0011690 BN2166_0011790 BN2166_0011790 BN2166_0010210 BN2166_0010210 BN2166_0012480 BN2166_0012480 BN2166_0019340 BN2166_0019340 BN2166_0017680 BN2166_0017680 BN2166_0017210 BN2166_0017210 BN2166_0021540 BN2166_0021540 BN2166_0022730 BN2166_0022730 BN2166_0024630 BN2166_0024630 BN2166_0028890 BN2166_0028890 BN2166_0012070 BN2166_0012070 BN2166_0031190 BN2166_0031190 BN2166_0028860 BN2166_0028860 BN2166_0031510 BN2166_0031510 BN2166_0032010 BN2166_0032010 BN2166_0036180 BN2166_0036180 BN2166_0037530 BN2166_0037530 BN2166_0049900 BN2166_0049900 BN2166_0051750 BN2166_0051750 BN2166_0049190 BN2166_0049190 BN2166_0046630 BN2166_0046630 BN2166_0049940 BN2166_0049940 BN2166_0059200 BN2166_0059200 BN2166_0049880 BN2166_0049880 BN2166_0065300 BN2166_0065300 BN2166_0056530 BN2166_0056530 BN2166_0041370 BN2166_0041370 BN2166_0056060 BN2166_0056060 BN2166_0043020 BN2166_0043020 BN2166_0046520 BN2166_0046520 BN2166_0048320 BN2166_0048320 BN2166_0064130 BN2166_0064130 BN2166_0050170 BN2166_0050170 BN2166_0068240 BN2166_0068240 BN2166_0065310 BN2166_0065310 BN2166_0071510 BN2166_0071510 BN2166_0074430 BN2166_0074430 BN2166_0069270 BN2166_0069270 BN2166_0072420 BN2166_0072420 BN2166_0059700 BN2166_0059700 BN2166_0000300 BN2166_0000300
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0003950Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. (709 aa)
BN2166_0002340Uridine kinase; Belongs to the uridine kinase family. (551 aa)
BN2166_0005090FGENESH: predicted gene_1.509 protein. (89 aa)
BN2166_0005340GDA1/CD39 (Nucleoside phosphatase) family-domain containing protein; Belongs to the GDA1/CD39 NTPase family. (927 aa)
BN2166_0014650annotation not available (280 aa)
BN2166_0006790BY PROTMAP: gi|342320672|gb|EGU12611.1| putative dCMP deaminase [Rhodotorula glutinis ATCC 204091]. (889 aa)
BN2166_0020300Carbamoyl-phosphate synthase. (441 aa)
BN2166_0011690annotation not available (410 aa)
BN2166_0011790BY PROTMAP: gi|342321391|gb|EGU13325.1| Spermidine synthase [Rhodotorula glutinis ATCC 204091]. (1180 aa)
BN2166_0010210Orotidine 5'-phosphate decarboxylase. (279 aa)
BN2166_0012480annotation not available (449 aa)
BN2166_0019340Uridylate kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and dUMP as phosphate acceptors, but can also use CMP, dCMP and AMP. Belongs to the adenylate kinase family. UMP-CMP kinase subfamily. (234 aa)
BN2166_0017680BY PROTMAP: gi|647400420|emb|CDR45856.1| RHTO0S11e05666g1_1 [Rhodosporidium toruloides]. (659 aa)
BN2166_0017210annotation not available (646 aa)
BN2166_0021540Endoribonuclease L-PSP/chorismate mutase-like protein. (131 aa)
BN2166_0022730annotation not available (567 aa)
BN2166_0024630Inosine/uridine-preferring nucleoside hydrolase domain-containing protein. (448 aa)
BN2166_0028890BY PROTMAP: gi|814540016|emb|CEQ42646.1| SPOSA6832_04462 [Sporidiobolus salmonicolor]. (221 aa)
BN2166_0012070Tubulin-tyrosine ligase family-domain containing protein. (465 aa)
BN2166_0031190BY PROTMAP: gi|472585042|gb|EMS22608.1| uridine phosphorylase [Rhodosporidium toruloides NP11]. (244 aa)
BN2166_0028860Ribonucleotide reductase, small chain-domain containing protein. (407 aa)
BN2166_0031510BY PROTMAP: gi|342319597|gb|EGU11544.1| Cytosine deaminase [Rhodotorula glutinis ATCC 204091]. (165 aa)
BN2166_0032010BY PROTMAP: gi|647400099|emb|CDR45208.1| RHTO0S10e06766g2_1 [Rhodosporidium toruloides]. (205 aa)
BN2166_0036180Armadillo/beta-catenin/plakoglobin. (211 aa)
BN2166_0037530Deoxythymidylate kinase. (228 aa)
BN2166_0049900BY PROTMAP: gi|647396625|emb|CDR39064.1| RHTO0S04e00474g1_1 [Rhodosporidium toruloides]. (349 aa)
BN2166_0051750annotation not available (140 aa)
BN2166_0049190annotation not available (676 aa)
BN2166_0046630Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. (173 aa)
BN2166_0049940BY PROTMAP: gi|342321305|gb|EGU13239.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (1681 aa)
BN2166_0059200GroES (Chaperonin 10)-like protein; Belongs to the GroES chaperonin family. (105 aa)
BN2166_0049880annotation not available (780 aa)
BN2166_0065300BY PROTMAP: gi|342319031|gb|EGU10983.1| Thymidylate synthase [Rhodotorula glutinis ATCC 204091]. (417 aa)
BN2166_0056530BY PROTMAP: gi|647399595|emb|CDR44484.1| RHTO0S09e04808g1_1 [Rhodosporidium toruloides]. (128 aa)
BN2166_0041370Nucleoside diphosphate kinase. (149 aa)
BN2166_0056060Belongs to the GDA1/CD39 NTPase family. (566 aa)
BN2166_0043020BY PROTMAP: gi|814541259|emb|CEQ41475.1| SPOSA6832_03181, partial [Sporidiobolus salmonicolor]. (395 aa)
BN2166_0046520annotation not available (372 aa)
BN2166_0048320CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. (595 aa)
BN2166_0064130FGENESH: predicted gene_13.243 protein. (285 aa)
BN2166_0050170annotation not available (2239 aa)
BN2166_0068240annotation not available (499 aa)
BN2166_0065310BY PROTMAP: gi|342319030|gb|EGU10982.1| Thymidylate synthase [Rhodotorula glutinis ATCC 204091]. (324 aa)
BN2166_0071510TLC domain-containing protein. (343 aa)
BN2166_0074430BY PROTMAP: gi|342320368|gb|EGU12309.1| Phenylhydantoinase [Rhodotorula glutinis ATCC 204091]. (513 aa)
BN2166_0069270Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. (837 aa)
BN2166_0072420Armadillo-type fold. (1058 aa)
BN2166_0059700RHTO0S05e06590g1_1; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (275 aa)
BN2166_0000300BY PROTMAP: gi|342320601|gb|EGU12540.1| putative dUTPase Dut [Rhodotorula glutinis ATCC 204091]. (259 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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