STRINGSTRING
BN2166_0007990 BN2166_0007990 BN2166_0074420 BN2166_0074420 BN2166_0072320 BN2166_0072320 BN2166_0066620 BN2166_0066620 BN2166_0060720 BN2166_0060720 BN2166_0060520 BN2166_0060520 BN2166_0071810 BN2166_0071810 BN2166_0058120 BN2166_0058120 BN2166_0057020 BN2166_0057020 BN2166_0054170 BN2166_0054170 BN2166_0053420 BN2166_0053420 BN2166_0053320 BN2166_0053320 BN2166_0069140 BN2166_0069140 BN2166_0074200 BN2166_0074200 BN2166_0067040 BN2166_0067040 BN2166_0047770 BN2166_0047770 BN2166_0058110 BN2166_0058110 BN2166_0068600 BN2166_0068600 BN2166_0059640 BN2166_0059640 BN2166_0058090 BN2166_0058090 BN2166_0039370 BN2166_0039370 BN2166_0051410 BN2166_0051410 BN2166_0054840 BN2166_0054840 BN2166_0036920 BN2166_0036920 BN2166_0046610 BN2166_0046610 BN2166_0050640 BN2166_0050640 BN2166_0055500 BN2166_0055500 BN2166_0042530 BN2166_0042530 BN2166_0045690 BN2166_0045690 BN2166_0044090 BN2166_0044090 BN2166_0041690 BN2166_0041690 BN2166_0039140 BN2166_0039140 BN2166_0032330 BN2166_0032330 BN2166_0014720 BN2166_0014720 BN2166_0038950 BN2166_0038950 BN2166_0026980 BN2166_0026980 BN2166_0009870 BN2166_0009870 BN2166_0022410 BN2166_0022410 BN2166_0032400 BN2166_0032400 BN2166_0016810 BN2166_0016810 BN2166_0002720 BN2166_0002720 BN2166_0002470 BN2166_0002470 BN2166_0026550 BN2166_0026550 BN2166_0026350 BN2166_0026350 BN2166_0012560 BN2166_0012560 BN2166_0008350 BN2166_0008350 BN2166_0007650 BN2166_0007650 BN2166_0007600 BN2166_0007600 BN2166_0006400 BN2166_0006400 BN2166_0004000 BN2166_0004000 BN2166_0059700 BN2166_0059700
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0007990Tryptophan synthase. (704 aa)
BN2166_0074420FGENESH: predicted gene_18.93 protein. (329 aa)
BN2166_0072320BY PROTMAP: gi|342320779|gb|EGU12718.1| GMC oxidoreductase [Rhodotorula glutinis ATCC 204091]. (715 aa)
BN2166_0066620BY PROTMAP: gi|647400586|emb|CDR46191.1| RHTO0S12e01420g1_1 [Rhodosporidium toruloides]. (437 aa)
BN2166_0060720Semialdehyde dehydrogenase, dimerization domain-domain containing protein. (363 aa)
BN2166_0060520Amine oxidase. (714 aa)
BN2166_0071810Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (299 aa)
BN2166_0058120Dihydrolipoyl dehydrogenase. (386 aa)
BN2166_0057020Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. (214 aa)
BN2166_0054170Belongs to the peptidase M24B family. (648 aa)
BN2166_0053420Putative phosphoglycerate mutase family protein. (243 aa)
BN2166_0053320BY PROTMAP: gi|472584245|gb|EMS21851.1| cystathionine gamma-lyase [Rhodosporidium toruloides NP11]. (458 aa)
BN2166_0069140annotation not available (549 aa)
BN2166_0074200Serine dehydratase alpha chain-domain containing protein. (645 aa)
BN2166_0067040Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (343 aa)
BN2166_0047770Uncharacterized protein. (524 aa)
BN2166_0058110FGENESH: predicted gene_11.307 protein. (123 aa)
BN2166_0068600annotation not available (635 aa)
BN2166_0059640annotation not available (1052 aa)
BN2166_0058090BY PROTMAP: gi|342320267|gb|EGU12209.1| D-glycerate 3-kinase [Rhodotorula glutinis ATCC 204091]. (325 aa)
BN2166_0039370annotation not available (368 aa)
BN2166_0051410Uncharacterized protein. (394 aa)
BN2166_0054840Glycine hydroxymethyltransferase. (471 aa)
BN2166_0036920Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. (168 aa)
BN2166_0046610Arginine methyl transferase. (441 aa)
BN2166_0050640BY PROTMAP: gi|342321273|gb|EGU13207.1| Homoserine dehydrogenase [Rhodotorula glutinis ATCC 204091]. (467 aa)
BN2166_0055500annotation not available (642 aa)
BN2166_0042530Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (540 aa)
BN2166_0045690FGENESH: predicted gene_8.424 protein. (433 aa)
BN2166_0044090BY PROTMAP: gi|342321546|gb|EGU13479.1| D-amino-acid oxidase [Rhodotorula glutinis ATCC 204091]. (748 aa)
BN2166_0041690BY PROTMAP: gi|342321638|gb|EGU13571.1| Cysteine synthase [Rhodotorula glutinis ATCC 204091]. (379 aa)
BN2166_0039140BY PROTMAP: gi|647398886|emb|CDR43153.1| RHTO0S07e08900g1_1 [Rhodosporidium toruloides]. (272 aa)
BN2166_0032330Belongs to the peptidase M24B family. (648 aa)
BN2166_0014720annotation not available (236 aa)
BN2166_0038950annotation not available (420 aa)
BN2166_0026980Peptidase M24. (546 aa)
BN2166_0009870BY PROTMAP: gi|472580777|gb|EMS18550.1| homoserine dehydrogenase [Rhodosporidium toruloides NP11]. (533 aa)
BN2166_0022410BY PROTMAP: gi|647402285|emb|CDR48567.1| RHTO0S18e02960g1_1 [Rhodosporidium toruloides]. (630 aa)
BN2166_0032400Aspartate/glutamate/uridylate kinase. (586 aa)
BN2166_0016810Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. (431 aa)
BN2166_00027205-aminolevulinate synthase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. (646 aa)
BN2166_0002470annotation not available (376 aa)
BN2166_0026550Peptidase M24, structural domain-containing protein. (485 aa)
BN2166_0026350Amine oxidase. (781 aa)
BN2166_0012560Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. (236 aa)
BN2166_0008350Threonine dehydratase. (628 aa)
BN2166_0007650Pyridoxal phosphate-dependent transferase. (428 aa)
BN2166_0007600annotation not available (380 aa)
BN2166_0006400D-3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (483 aa)
BN2166_0004000FGENESH: predicted gene_1.400 protein. (401 aa)
BN2166_0059700RHTO0S05e06590g1_1; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (275 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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