(29 nodes) Lysine biosynthesis network (Rhodotorula toruloides)

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

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Your Input:
	BN2166_0025110	FGENESH: predicted gene_5.56 protein. (527 aa)
	BN2166_0012250	Major facilitator superfamily domain-containing protein. (500 aa)
	BN2166_0060720	Semialdehyde dehydrogenase, dimerization domain-domain containing protein. (363 aa)
	BN2166_0059820	Major facilitator superfamily domain-containing protein. (597 aa)
	BN2166_0071710	BY PROTMAP: gi\|647396476\|emb\|CDR38716.1\| RHTO0S03e12508g1_1 [Rhodosporidium toruloides]. (494 aa)
	BN2166_0057270	annotation not available (467 aa)
	BN2166_0071840	FGENESH: predicted gene_17.42 protein. (3285 aa)
	BN2166_0061630	Putative LYS12-homo-isocitrate dehydrogenase. (363 aa)
	BN2166_0053660	FGENESH: predicted gene_10.203 protein. (486 aa)
	BN2166_0053280	L-aminoadipate-semialdehyde dehydrogenase. (1504 aa)
	BN2166_0051430	Belongs to the spermidine/spermine synthase family. (788 aa)
	BN2166_0050640	BY PROTMAP: gi\|342321273\|gb\|EGU13207.1\| Homoserine dehydrogenase [Rhodotorula glutinis ATCC 204091]. (467 aa)
	BN2166_0031820	Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family. (804 aa)
	BN2166_0045530	FGENESH: predicted gene_8.408 protein. (477 aa)
	BN2166_0013100	Carboxylic ester hydrolase; Belongs to the tannase family. (550 aa)
	BN2166_0006660	annotation not available (491 aa)
	BN2166_0011080	BY PROTMAP: gi\|647401743\|emb\|CDR48098.1\| RHTO0S16e01200g1_1 [Rhodosporidium toruloides]. (506 aa)
	BN2166_0015610	BY PROTMAP: gi\|647400189\|emb\|CDR45454.1\| RHTO0S11e00386g1_1 [Rhodosporidium toruloides]. (495 aa)
	BN2166_0019830	BY PROTMAP: gi\|472586746\|gb\|EMS24265.1\| MFS transporter [Rhodosporidium toruloides NP11]. (498 aa)
	BN2166_0032400	Aspartate/glutamate/uridylate kinase. (586 aa)
	BN2166_0034550	Pyridoxal phosphate-dependent transferase. (528 aa)
	BN2166_0053800	MFS general substrate transporter. (509 aa)
	BN2166_0022670	BY PROTMAP: gi\|647402256\|emb\|CDR48538.1\| RHTO0S18e02256g1_1 [Rhodosporidium toruloides]. (485 aa)
	BN2166_0034060	FGENESH: predicted gene_6.328 protein; Belongs to the alpha-IPM synthase/homocitrate synthase family. (440 aa)
	BN2166_0019770	FGENESH: predicted gene_3.428 protein. (483 aa)
	BN2166_0044300	Homoaconitase, mitochondrial; Catalyzes the reversible hydration of cis-homoaconitate to (2R,3S)-homoisocitrate, a step in the alpha-aminoadipate pathway for lysine biosynthesis. (727 aa)
	BN2166_0042750	Pyridoxal phosphate-dependent transferase. (602 aa)
	BN2166_0027510	Saccharopine dehydrogenase [NAD(+), L-lysine-forming]; Belongs to the AlaDH/PNT family. (398 aa)
	BN2166_0009870	BY PROTMAP: gi\|472580777\|gb\|EMS18550.1\| homoserine dehydrogenase [Rhodosporidium toruloides NP11]. (533 aa)

Your Current Organism:

Rhodotorula toruloides

NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN2166_0009870	BN2166_0032400	A0A0K3CD65	A0A0K3CCC1	BY PROTMAP: gi\|472580777\|gb\|EMS18550.1\| homoserine dehydrogenase [Rhodosporidium toruloides NP11].	Aspartate/glutamate/uridylate kinase.	0.991
BN2166_0009870	BN2166_0034550	A0A0K3CD65	A0A0K3CCW5	BY PROTMAP: gi\|472580777\|gb\|EMS18550.1\| homoserine dehydrogenase [Rhodosporidium toruloides NP11].	Pyridoxal phosphate-dependent transferase.	0.600
BN2166_0009870	BN2166_0042750	A0A0K3CD65	A0A0K3CFD0	BY PROTMAP: gi\|472580777\|gb\|EMS18550.1\| homoserine dehydrogenase [Rhodosporidium toruloides NP11].	Pyridoxal phosphate-dependent transferase.	0.600
BN2166_0009870	BN2166_0060720	A0A0K3CD65	A0A0K3CSP2	BY PROTMAP: gi\|472580777\|gb\|EMS18550.1\| homoserine dehydrogenase [Rhodosporidium toruloides NP11].	Semialdehyde dehydrogenase, dimerization domain-domain containing protein.	0.946
BN2166_0027510	BN2166_0034060	A0A0K3CEB8	A0A0K3CG94	Saccharopine dehydrogenase [NAD(+), L-lysine-forming]; Belongs to the AlaDH/PNT family.	FGENESH: predicted gene_6.328 protein; Belongs to the alpha-IPM synthase/homocitrate synthase family.	0.467
BN2166_0027510	BN2166_0044300	A0A0K3CEB8	A0A0K3CFR8	Saccharopine dehydrogenase [NAD(+), L-lysine-forming]; Belongs to the AlaDH/PNT family.	Homoaconitase, mitochondrial; Catalyzes the reversible hydration of cis-homoaconitate to (2R,3S)-homoisocitrate, a step in the alpha-aminoadipate pathway for lysine biosynthesis.	0.537
BN2166_0027510	BN2166_0051430	A0A0K3CEB8	A0A0K3CKT5	Saccharopine dehydrogenase [NAD(+), L-lysine-forming]; Belongs to the AlaDH/PNT family.	Belongs to the spermidine/spermine synthase family.	0.924
BN2166_0027510	BN2166_0053280	A0A0K3CEB8	A0A0K3CL97	Saccharopine dehydrogenase [NAD(+), L-lysine-forming]; Belongs to the AlaDH/PNT family.	L-aminoadipate-semialdehyde dehydrogenase.	0.782
BN2166_0027510	BN2166_0060720	A0A0K3CEB8	A0A0K3CSP2	Saccharopine dehydrogenase [NAD(+), L-lysine-forming]; Belongs to the AlaDH/PNT family.	Semialdehyde dehydrogenase, dimerization domain-domain containing protein.	0.655
BN2166_0027510	BN2166_0061630	A0A0K3CEB8	A0A0K3CNQ1	Saccharopine dehydrogenase [NAD(+), L-lysine-forming]; Belongs to the AlaDH/PNT family.	Putative LYS12-homo-isocitrate dehydrogenase.	0.590
BN2166_0031820	BN2166_0034060	A0A0K3CJI6	A0A0K3CG94	Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.	FGENESH: predicted gene_6.328 protein; Belongs to the alpha-IPM synthase/homocitrate synthase family.	0.948
BN2166_0031820	BN2166_0044300	A0A0K3CJI6	A0A0K3CFR8	Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.	Homoaconitase, mitochondrial; Catalyzes the reversible hydration of cis-homoaconitate to (2R,3S)-homoisocitrate, a step in the alpha-aminoadipate pathway for lysine biosynthesis.	0.949
BN2166_0031820	BN2166_0051430	A0A0K3CJI6	A0A0K3CKT5	Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.	Belongs to the spermidine/spermine synthase family.	0.413
BN2166_0031820	BN2166_0053280	A0A0K3CJI6	A0A0K3CL97	Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.	L-aminoadipate-semialdehyde dehydrogenase.	0.494
BN2166_0031820	BN2166_0061630	A0A0K3CJI6	A0A0K3CNQ1	Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.	Putative LYS12-homo-isocitrate dehydrogenase.	0.789
BN2166_0032400	BN2166_0009870	A0A0K3CCC1	A0A0K3CD65	Aspartate/glutamate/uridylate kinase.	BY PROTMAP: gi\|472580777\|gb\|EMS18550.1\| homoserine dehydrogenase [Rhodosporidium toruloides NP11].	0.991
BN2166_0032400	BN2166_0034060	A0A0K3CCC1	A0A0K3CG94	Aspartate/glutamate/uridylate kinase.	FGENESH: predicted gene_6.328 protein; Belongs to the alpha-IPM synthase/homocitrate synthase family.	0.483
BN2166_0032400	BN2166_0034550	A0A0K3CCC1	A0A0K3CCW5	Aspartate/glutamate/uridylate kinase.	Pyridoxal phosphate-dependent transferase.	0.734
BN2166_0032400	BN2166_0042750	A0A0K3CCC1	A0A0K3CFD0	Aspartate/glutamate/uridylate kinase.	Pyridoxal phosphate-dependent transferase.	0.734
BN2166_0032400	BN2166_0050640	A0A0K3CCC1	A0A0K3CJU2	Aspartate/glutamate/uridylate kinase.	BY PROTMAP: gi\|342321273\|gb\|EGU13207.1\| Homoserine dehydrogenase [Rhodotorula glutinis ATCC 204091].	0.991

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