(31 nodes) Sulfur metabolism network (Rhodotorula toruloides)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

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Your Input:
	BN2166_0043200	annotation not available (1331 aa)
	BN2166_0003010	Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate. (208 aa)
	BN2166_0003330	FGENESH: predicted gene_1.333 protein. (1573 aa)
	BN2166_0009430	annotation not available (383 aa)
	BN2166_0021600	annotation not available (499 aa)
	BN2166_0013590	annotation not available (493 aa)
	BN2166_0022750	Putative Metallo-beta-lactamase domain protein. (329 aa)
	BN2166_0018640	BY PROTMAP: gi\|342320074\|gb\|EGU12017.1\| Cysteine synthase [Rhodotorula glutinis ATCC 204091]. (970 aa)
	BN2166_0002220	annotation not available (766 aa)
	BN2166_0022760	annotation not available (446 aa)
	BN2166_0035990	zf-4CXXC_R1 domain-containing protein. (1000 aa)
	BN2166_0033010	Mitochondrial import inner membrane translocase subunit TIM22. (190 aa)
	BN2166_0035980	FGENESH: predicted gene_6.520 protein. (318 aa)
	BN2166_0036230	Rhodanese-like domain-containing protein. (188 aa)
	BN2166_0024820	BY PROTMAP: gi\|342320827\|gb\|EGU12765.1\| DUF967 domain protein [Rhodotorula glutinis ATCC 204091]. (184 aa)
	BN2166_0045930	BY PROTMAP: gi\|647397094\|emb\|CDR39862.1\| RHTO0S04e11056g1_1 [Rhodosporidium toruloides]. (368 aa)
	BN2166_0049040	annotation not available (341 aa)
	BN2166_0050540	BY PROTMAP: gi\|647403143\|emb\|CDR49301.1\| RHTO0S25e00782g2_1 [Rhodosporidium toruloides]. (309 aa)
	BN2166_0049630	O-acetylhomoserine ami. (435 aa)
	BN2166_0059800	Uncharacterized protein. (284 aa)
	BN2166_0050830	FGENESH: predicted gene_9.429 protein. (436 aa)
	BN2166_0054790	annotation not available (375 aa)
	BN2166_0061140	annotation not available (1368 aa)
	BN2166_0059830	Alpha-ketoglutarate-dependent sulfonate dioxygenase. (369 aa)
	BN2166_0063790	Uncharacterized protein. (354 aa)
	BN2166_0046020	annotation not available (434 aa)
	BN2166_0062130	annotation not available (318 aa)
	BN2166_0050670	BY PROTMAP: gi\|647403126\|emb\|CDR49284.1\| RHTO0S25e00430g1_1 [Rhodosporidium toruloides]. (407 aa)
	BN2166_0070790	Putative cystathionine gamma-synthase. (774 aa)
	BN2166_0055420	FGENESH: predicted gene_11.38 protein. (247 aa)
	BN2166_0073280	Putative Phosphoadenylyl-sulfate reductase Thioredoxin. (308 aa)

Your Current Organism:

Rhodotorula toruloides

NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN2166_0003010	BN2166_0003330	A0A061AW89	A0A0K3C730	Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.	FGENESH: predicted gene_1.333 protein.	0.991
BN2166_0003010	BN2166_0009430	A0A061AW89	A0A0K3C8V2	Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.	annotation not available	0.559
BN2166_0003010	BN2166_0018640	A0A061AW89	A0A0K3CAU2	Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.	BY PROTMAP: gi\|342320074\|gb\|EGU12017.1\| Cysteine synthase [Rhodotorula glutinis ATCC 204091].	0.559
BN2166_0003010	BN2166_0021600	A0A061AW89	A0A0K3C9A6	Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.	annotation not available	0.988
BN2166_0003010	BN2166_0036230	A0A061AW89	A0A0K3CGP4	Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.	Rhodanese-like domain-containing protein.	0.783
BN2166_0003010	BN2166_0045930	A0A061AW89	A0A0K3CJA5	Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.	BY PROTMAP: gi\|647397094\|emb\|CDR39862.1\| RHTO0S04e11056g1_1 [Rhodosporidium toruloides].	0.576
BN2166_0003010	BN2166_0046020	A0A061AW89	A0A0K3CNI7	Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.	annotation not available	0.576
BN2166_0003010	BN2166_0049040	A0A061AW89	A0A0K3CJB5	Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.	annotation not available	0.766
BN2166_0003010	BN2166_0049630	A0A061AW89	A0A0K3CK82	Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.	O-acetylhomoserine ami.	0.691
BN2166_0003010	BN2166_0050830	A0A061AW89	A0A0K3CKK6	Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.	FGENESH: predicted gene_9.429 protein.	0.601
BN2166_0003010	BN2166_0061140	A0A061AW89	A0A0K3CMP9	Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.	annotation not available	0.875
BN2166_0003010	BN2166_0063790	A0A061AW89	A0A0K3CNG3	Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.	Uncharacterized protein.	0.918
BN2166_0003010	BN2166_0073280	A0A061AW89	A0A0K3CRW2	Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.	Putative Phosphoadenylyl-sulfate reductase Thioredoxin.	0.992
BN2166_0003330	BN2166_0003010	A0A0K3C730	A0A061AW89	FGENESH: predicted gene_1.333 protein.	Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.	0.991
BN2166_0003330	BN2166_0009430	A0A0K3C730	A0A0K3C8V2	FGENESH: predicted gene_1.333 protein.	annotation not available	0.889
BN2166_0003330	BN2166_0018640	A0A0K3C730	A0A0K3CAU2	FGENESH: predicted gene_1.333 protein.	BY PROTMAP: gi\|342320074\|gb\|EGU12017.1\| Cysteine synthase [Rhodotorula glutinis ATCC 204091].	0.889
BN2166_0003330	BN2166_0021600	A0A0K3C730	A0A0K3C9A6	FGENESH: predicted gene_1.333 protein.	annotation not available	0.974
BN2166_0003330	BN2166_0022750	A0A0K3C730	A0A0K3C9J1	FGENESH: predicted gene_1.333 protein.	Putative Metallo-beta-lactamase domain protein.	0.784
BN2166_0003330	BN2166_0022760	A0A0K3C730	A0A0K3CCZ1	FGENESH: predicted gene_1.333 protein.	annotation not available	0.821
BN2166_0003330	BN2166_0036230	A0A0K3C730	A0A0K3CGP4	FGENESH: predicted gene_1.333 protein.	Rhodanese-like domain-containing protein.	0.896

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