STRINGSTRING
BN2166_0048920 BN2166_0048920 BN2166_0048390 BN2166_0048390 BN2166_0003350 BN2166_0003350 BN2166_0004550 BN2166_0004550 BN2166_0003390 BN2166_0003390 BN2166_0005040 BN2166_0005040 BN2166_0001360 BN2166_0001360 BN2166_0003930 BN2166_0003930 BN2166_0004980 BN2166_0004980 BN2166_0005130 BN2166_0005130 BN2166_0007490 BN2166_0007490 BN2166_0007690 BN2166_0007690 BN2166_0010090 BN2166_0010090 BN2166_0019750 BN2166_0019750 BN2166_0007910 BN2166_0007910 BN2166_0012690 BN2166_0012690 BN2166_0011130 BN2166_0011130 BN2166_0054750 BN2166_0054750 BN2166_0023450 BN2166_0023450 BN2166_0013130 BN2166_0013130 BN2166_0015440 BN2166_0015440 BN2166_0017590 BN2166_0017590 BN2166_0015510 BN2166_0015510 BN2166_0016210 BN2166_0016210 BN2166_0019940 BN2166_0019940 BN2166_0004070 BN2166_0004070 BN2166_0019510 BN2166_0019510 BN2166_0019760 BN2166_0019760 BN2166_0006070 BN2166_0006070 BN2166_0006120 BN2166_0006120 BN2166_0031800 BN2166_0031800 BN2166_0021760 BN2166_0021760 BN2166_0025990 BN2166_0025990 BN2166_0022930 BN2166_0022930 BN2166_0036050 BN2166_0036050 BN2166_0010620 BN2166_0010620 BN2166_0013120 BN2166_0013120 BN2166_0027160 BN2166_0027160 BN2166_0028730 BN2166_0028730 BN2166_0015170 BN2166_0015170 BN2166_0040450 BN2166_0040450 BN2166_0032590 BN2166_0032590 BN2166_0042300 BN2166_0042300 BN2166_0031280 BN2166_0031280 BN2166_0018570 BN2166_0018570 BN2166_0032610 BN2166_0032610 BN2166_0045350 BN2166_0045350 BN2166_0034680 BN2166_0034680 BN2166_0040240 BN2166_0040240 BN2166_0036530 BN2166_0036530 BN2166_0036360 BN2166_0036360 BN2166_0048900 BN2166_0048900 BN2166_0038180 BN2166_0038180 BN2166_0041490 BN2166_0041490 BN2166_0052550 BN2166_0052550 BN2166_0029020 BN2166_0029020 BN2166_0053350 BN2166_0053350 BN2166_0041910 BN2166_0041910 BN2166_0042310 BN2166_0042310 BN2166_0046580 BN2166_0046580 BN2166_0058050 BN2166_0058050 BN2166_0048480 BN2166_0048480 BN2166_0058750 BN2166_0058750 BN2166_0058950 BN2166_0058950 BN2166_0060000 BN2166_0060000 BN2166_0037120 BN2166_0037120 BN2166_0054430 BN2166_0054430 BN2166_0054980 BN2166_0054980 BN2166_0040220 BN2166_0040220 BN2166_0066250 BN2166_0066250 BN2166_0056930 BN2166_0056930 BN2166_0058130 BN2166_0058130 BN2166_0057410 BN2166_0057410 BN2166_0045570 BN2166_0045570 BN2166_0063080 BN2166_0063080 BN2166_0061160 BN2166_0061160 BN2166_0062410 BN2166_0062410 BN2166_0065130 BN2166_0065130 BN2166_0066210 BN2166_0066210 BN2166_0072060 BN2166_0072060 BN2166_0059220 BN2166_0059220 BN2166_0059570 BN2166_0059570 BN2166_0059620 BN2166_0059620 BN2166_0061770 BN2166_0061770 BN2166_0062070 BN2166_0062070 BN2166_0064220 BN2166_0064220 BN2166_0064870 BN2166_0064870 BN2166_0007280 BN2166_0007280 BN2166_0054080 BN2166_0054080
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0048920annotation not available (947 aa)
BN2166_0048390FGENESH: predicted gene_9.185 protein. (101 aa)
BN2166_0003350FGENESH: predicted gene_1.335 protein. (322 aa)
BN2166_0004550Ubiquitin carrier protein. (184 aa)
BN2166_0003390annotation not available (153 aa)
BN2166_0005040Uncharacterized protein. (150 aa)
BN2166_0001360DUF1681 domain-containing protein. (455 aa)
BN2166_0003930Uncharacterized protein. (862 aa)
BN2166_0004980Uncharacterized protein. (740 aa)
BN2166_0005130BY PROTMAP: gi|342320740|gb|EGU12679.1| NEDD8 activating enzyme [Rhodotorula glutinis ATCC 204091]. (426 aa)
BN2166_0007490annotation not available (441 aa)
BN2166_0007690FGENESH: predicted gene_1.769 protein. (1389 aa)
BN2166_0010090Belongs to the ubiquitin-conjugating enzyme family. (111 aa)
BN2166_0019750FGENESH: predicted gene_3.426 protein. (329 aa)
BN2166_0007910FGENESH: predicted gene_1.791 protein. (2059 aa)
BN2166_0012690BY PROTMAP: gi|342321406|gb|EGU13340.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (1186 aa)
BN2166_0011130Putative ubiquitin-protein ligase. (1056 aa)
BN2166_0054750RHTO0S01e00914g1_1; Belongs to the SKP1 family. (101 aa)
BN2166_0023450Belongs to the ubiquitin-conjugating enzyme family. (184 aa)
BN2166_0013130FGENESH: predicted gene_2.482 protein. (476 aa)
BN2166_0015440BY PROTMAP: gi|647401368|emb|CDR47556.1| RHTO0S14e05204g1_1 [Rhodosporidium toruloides]. (767 aa)
BN2166_0017590FGENESH: predicted gene_3.210 protein. (1424 aa)
BN2166_0015510Belongs to the ubiquitin-conjugating enzyme family. (187 aa)
BN2166_0016210annotation not available (705 aa)
BN2166_0019940Cortical protein marker for cell polarity-domain containing protein. (1382 aa)
BN2166_0004070annotation not available (571 aa)
BN2166_0019510ANAPC5 domain-containing protein. (680 aa)
BN2166_0019760annotation not available (230 aa)
BN2166_0006070Belongs to the SKP1 family. (171 aa)
BN2166_0006120Belongs to the ubiquitin-conjugating enzyme family. (154 aa)
BN2166_0031800FGENESH: predicted gene_6.102 protein. (271 aa)
BN2166_0021760WD40-repeat-containing domain protein. (828 aa)
BN2166_0025990annotation not available (959 aa)
BN2166_0022930annotation not available (123 aa)
BN2166_0036050annotation not available (751 aa)
BN2166_0010620Ribosome biogenesis protein Noc4. (647 aa)
BN2166_0013120WD40-repeat-containing domain protein. (856 aa)
BN2166_0027160Belongs to the cullin family. (746 aa)
BN2166_0028730Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. (182 aa)
BN2166_0015170annotation not available (1023 aa)
BN2166_0040450BY PROTMAP: gi|647401527|emb|CDR47830.1| RHTO0S15e02520g1_1 [Rhodosporidium toruloides]. (1125 aa)
BN2166_0032590BY PROTMAP: gi|647400037|emb|CDR45136.1| RHTO0S10e05402g1_1 [Rhodosporidium toruloides]. (3819 aa)
BN2166_0042300Cell division control protein 16. (727 aa)
BN2166_0031280BY PROTMAP: gi|342319583|gb|EGU11530.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (1217 aa)
BN2166_0018570Uncharacterized protein. (230 aa)
BN2166_0032610Belongs to the cullin family. (803 aa)
BN2166_0045350annotation not available (343 aa)
BN2166_0034680annotation not available (1141 aa)
BN2166_0040240BY PROTMAP: gi|342320419|gb|EGU12359.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (1583 aa)
BN2166_0036530Putative 20S cyclosome subunit BimA/Nuc2/Cdc27. (921 aa)
BN2166_0036360annotation not available (375 aa)
BN2166_0048900Uncharacterized protein. (1121 aa)
BN2166_0038180E3 ubiquitin-protein ligase. (820 aa)
BN2166_0041490Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family. (179 aa)
BN2166_0052550annotation not available (701 aa)
BN2166_0029020Ubiquitin-related domain-containing protein. (154 aa)
BN2166_0053350Ubiquitin-activating enzyme E1-like; Belongs to the ubiquitin-activating E1 family. (647 aa)
BN2166_0041910BY PROTMAP: gi|814541231|emb|CEQ41447.1| SPOSA6832_03156, partial [Sporidiobolus salmonicolor]; Belongs to the cullin family. (873 aa)
BN2166_0042310FGENESH: predicted gene_8.86 protein. (1243 aa)
BN2166_0046580annotation not available (335 aa)
BN2166_0058050RING finger domain-containing protein. (128 aa)
BN2166_0048480annotation not available (948 aa)
BN2166_0058750BY PROTMAP: gi|342320584|gb|EGU12524.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (449 aa)
BN2166_0058950E3 ubiquitin-protein ligase. (863 aa)
BN2166_0060000WD40-repeat-containing domain protein. (599 aa)
BN2166_0037120BY PROTMAP: gi|342320546|gb|EGU12486.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (598 aa)
BN2166_0054430UBC-like protein. (188 aa)
BN2166_0054980BY PROTMAP: gi|647394255|emb|CDR35483.1| RHTO0S01e00254g1_1 [Rhodosporidium toruloides]. (943 aa)
BN2166_0040220BY PROTMAP: gi|814542956|emb|CEQ39987.1| SPOSA6832_01580 [Sporidiobolus salmonicolor]; Belongs to the ubiquitin-conjugating enzyme family. (145 aa)
BN2166_0066250annotation not available (1102 aa)
BN2166_0056930annotation not available (230 aa)
BN2166_0058130FGENESH: predicted gene_11.309 protein. (141 aa)
BN2166_0057410FGENESH: predicted gene_11.237 protein. (749 aa)
BN2166_0045570Putative phospholipid binding protein. (1354 aa)
BN2166_0063080BY PROTMAP: gi|342319493|gb|EGU11441.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (1161 aa)
BN2166_0061160Uncharacterized protein. (351 aa)
BN2166_0062410annotation not available (2117 aa)
BN2166_0065130annotation not available (1185 aa)
BN2166_0066210BY PROTMAP: gi|647400604|emb|CDR46228.1| RHTO0S12e01794g1_1 [Rhodosporidium toruloides]. (1112 aa)
BN2166_0072060annotation not available (968 aa)
BN2166_0059220UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (123 aa)
BN2166_0059570BY PROTMAP: gi|342321204|gb|EGU13139.1| Deoxyhypusine synthase [Rhodotorula glutinis ATCC 204091]. (366 aa)
BN2166_0059620RING-type domain-containing protein. (832 aa)
BN2166_0061770annotation not available (1108 aa)
BN2166_0062070Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family. (170 aa)
BN2166_0064220annotation not available (126 aa)
BN2166_0064870BY PROTMAP: gi|814540119|emb|CEQ42520.1| SPOSA6832_04345, partial [Sporidiobolus salmonicolor]; Belongs to the cullin family. (782 aa)
BN2166_0007280Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family. (171 aa)
BN2166_0054080Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.