STRINGSTRING
BN2166_0071270 BN2166_0071270 BN2166_0044440 BN2166_0044440 BN2166_0002710 BN2166_0002710 BN2166_0057070 BN2166_0057070 BN2166_0031930 BN2166_0031930 BN2166_0039680 BN2166_0039680 BN2166_0000900 BN2166_0000900 BN2166_0002250 BN2166_0002250 BN2166_0002700 BN2166_0002700 BN2166_0004300 BN2166_0004300 BN2166_0007050 BN2166_0007050 BN2166_0007700 BN2166_0007700 BN2166_0008850 BN2166_0008850 BN2166_0009350 BN2166_0009350 BN2166_0001690 BN2166_0001690 BN2166_0001280 BN2166_0001280 BN2166_0011400 BN2166_0011400 BN2166_0000010 BN2166_0000010 BN2166_0014150 BN2166_0014150 BN2166_0003930 BN2166_0003930 BN2166_0006730 BN2166_0006730 BN2166_0009690 BN2166_0009690 BN2166_0018250 BN2166_0018250 BN2166_0008080 BN2166_0008080 BN2166_0019350 BN2166_0019350 BN2166_0011490 BN2166_0011490 BN2166_0007960 BN2166_0007960 BN2166_0021650 BN2166_0021650 BN2166_0013690 BN2166_0013690 BN2166_0011530 BN2166_0011530 BN2166_0023000 BN2166_0023000 BN2166_0011310 BN2166_0011310 BN2166_0011910 BN2166_0011910 BN2166_0024350 BN2166_0024350 BN2166_0017240 BN2166_0017240 BN2166_0017340 BN2166_0017340 BN2166_0026900 BN2166_0026900 BN2166_0019440 BN2166_0019440 BN2166_0002970 BN2166_0002970 BN2166_0018330 BN2166_0018330 BN2166_0003970 BN2166_0003970 BN2166_0021640 BN2166_0021640 BN2166_0030950 BN2166_0030950 BN2166_0024440 BN2166_0024440 BN2166_0007370 BN2166_0007370 BN2166_0022080 BN2166_0022080 BN2166_0022280 BN2166_0022280 BN2166_0022330 BN2166_0022330 BN2166_0034250 BN2166_0034250 BN2166_0023010 BN2166_0023010 BN2166_0036500 BN2166_0036500 BN2166_0037050 BN2166_0037050 BN2166_0011720 BN2166_0011720 BN2166_0026330 BN2166_0026330 BN2166_0026380 BN2166_0026380 BN2166_0013020 BN2166_0013020 BN2166_0032390 BN2166_0032390 BN2166_0040550 BN2166_0040550 BN2166_0073170 BN2166_0073170 BN2166_0015670 BN2166_0015670 BN2166_0041150 BN2166_0041150 BN2166_0034090 BN2166_0034090 BN2166_0016320 BN2166_0016320 BN2166_0034790 BN2166_0034790 BN2166_0017170 BN2166_0017170 BN2166_0035940 BN2166_0035940 BN2166_0032130 BN2166_0032130 BN2166_0032480 BN2166_0032480 BN2166_0044200 BN2166_0044200 BN2166_0044350 BN2166_0044350 BN2166_0032360 BN2166_0032360 BN2166_0019820 BN2166_0019820 BN2166_0045250 BN2166_0045250 BN2166_0045350 BN2166_0045350 BN2166_0020720 BN2166_0020720 BN2166_0038540 BN2166_0038540 BN2166_0021120 BN2166_0021120 BN2166_0035210 BN2166_0035210 BN2166_0047700 BN2166_0047700 BN2166_0037160 BN2166_0037160 BN2166_0041140 BN2166_0041140 BN2166_0038180 BN2166_0038180 BN2166_0038930 BN2166_0038930 BN2166_0042890 BN2166_0042890 BN2166_0039360 BN2166_0039360 BN2166_0026320 BN2166_0026320 BN2166_0027220 BN2166_0027220 BN2166_0051700 BN2166_0051700 BN2166_0051900 BN2166_0051900 BN2166_0052600 BN2166_0052600 BN2166_0041410 BN2166_0041410 BN2166_0046540 BN2166_0046540 BN2166_0054450 BN2166_0054450 BN2166_0055100 BN2166_0055100 BN2166_0056550 BN2166_0056550 BN2166_0056950 BN2166_0056950 BN2166_0057050 BN2166_0057050 BN2166_0057400 BN2166_0057400 BN2166_0032370 BN2166_0032370 BN2166_0034270 BN2166_0034270 BN2166_0052690 BN2166_0052690 BN2166_0048210 BN2166_0048210 BN2166_0060650 BN2166_0060650 BN2166_0051280 BN2166_0051280 BN2166_0049210 BN2166_0049210 BN2166_0037270 BN2166_0037270 BN2166_0055140 BN2166_0055140 BN2166_0062000 BN2166_0062000 BN2166_0038120 BN2166_0038120 BN2166_0050910 BN2166_0050910 BN2166_0056190 BN2166_0056190 BN2166_0056790 BN2166_0056790 BN2166_0039620 BN2166_0039620 BN2166_0056940 BN2166_0056940 BN2166_0054830 BN2166_0054830 BN2166_0064400 BN2166_0064400 BN2166_0064700 BN2166_0064700 BN2166_0041070 BN2166_0041070 BN2166_0066400 BN2166_0066400 BN2166_0060440 BN2166_0060440 BN2166_0057630 BN2166_0057630 BN2166_0061940 BN2166_0061940 BN2166_0061990 BN2166_0061990 BN2166_0063540 BN2166_0063540 BN2166_0064540 BN2166_0064540 BN2166_0046370 BN2166_0046370 BN2166_0063030 BN2166_0063030 BN2166_0063130 BN2166_0063130 BN2166_0066290 BN2166_0066290 BN2166_0048570 BN2166_0048570 BN2166_0065230 BN2166_0065230 BN2166_0068090 BN2166_0068090 BN2166_0064410 BN2166_0064410 BN2166_0066330 BN2166_0066330 BN2166_0067480 BN2166_0067480 BN2166_0070890 BN2166_0070890 BN2166_0053870 BN2166_0053870 BN2166_0069730 BN2166_0069730 BN2166_0073290 BN2166_0073290 BN2166_0073340 BN2166_0073340 BN2166_0074440 BN2166_0074440 BN2166_0073080 BN2166_0073080 BN2166_0057620 BN2166_0057620 BN2166_0073380 BN2166_0073380 BN2166_0060320 BN2166_0060320 BN2166_0062520 BN2166_0062520 BN2166_0063570 BN2166_0063570 BN2166_0069970 BN2166_0069970
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0071270annotation not available (941 aa)
BN2166_0044440Ras family-domain containing protein. (213 aa)
BN2166_0002710ADP-ribosylation factor family-domain containing protein; Belongs to the small GTPase superfamily. Arf family. (196 aa)
BN2166_0057070ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family. (181 aa)
BN2166_0031930GTP-binding protein, SEC4. (215 aa)
BN2166_0039680Cell division control protein 42. (191 aa)
BN2166_0000900Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (273 aa)
BN2166_0002250annotation not available (225 aa)
BN2166_0002700BY PROTMAP: gi|342319356|gb|EGU11305.1| polyketide synthase [Rhodotorula glutinis ATCC 204091]. (471 aa)
BN2166_0004300annotation not available (542 aa)
BN2166_0007050FGENESH: predicted gene_1.705 protein. (657 aa)
BN2166_0007700BY PROTMAP: gi|342319290|gb|EGU11239.1| Sorting nexin-41 [Rhodotorula glutinis ATCC 204091]. (808 aa)
BN2166_0008850FGENESH: predicted gene_2.54 protein. (1060 aa)
BN2166_0009350BY PROTMAP: gi|472580168|gb|EMS18058.1| ribonuclease H, partial [Rhodosporidium toruloides NP11]. (186 aa)
BN2166_0001690annotation not available (941 aa)
BN2166_0001280BY PROTMAP: gi|342320639|gb|EGU12578.1| Hob3p [Rhodotorula glutinis ATCC 204091]. (983 aa)
BN2166_0011400Protein-S-isoprenylcysteine O-methyltransferase; Belongs to the class VI-like SAM-binding methyltransferase superfamily. Isoprenylcysteine carboxyl methyltransferase family. (1433 aa)
BN2166_0000010annotation not available (215 aa)
BN2166_0014150annotation not available (489 aa)
BN2166_0003930Uncharacterized protein. (862 aa)
BN2166_0006730Regulator of Vps4 activity in the MVB pathway-domain containing protein. (409 aa)
BN2166_0009690FGENESH: predicted gene_2.138 protein; Belongs to the peptidase C19 family. (1199 aa)
BN2166_0018250Snf7-domain containing protein. (218 aa)
BN2166_0008080annotation not available (744 aa)
BN2166_0019350Snf7-domain containing protein. (246 aa)
BN2166_0011490annotation not available (514 aa)
BN2166_0007960AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (143 aa)
BN2166_0021650Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (951 aa)
BN2166_0013690annotation not available (443 aa)
BN2166_0011530Glucose-inhibited division protein A subfamily. (706 aa)
BN2166_0023000BY PROTMAP: gi|647402218|emb|CDR48499.1| RHTO0S18e01398g1_1 [Rhodosporidium toruloides]. (858 aa)
BN2166_0011310annotation not available (239 aa)
BN2166_0011910Uncharacterized protein. (686 aa)
BN2166_0024350annotation not available (1571 aa)
BN2166_0017240Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (218 aa)
BN2166_0017340Magnesium transporter. (505 aa)
BN2166_0026900annotation not available (2072 aa)
BN2166_0019440Actin-related protein 2/3 complex subunit 4; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament; Belongs to the ARPC4 family. (174 aa)
BN2166_0002970Uncharacterized protein. (240 aa)
BN2166_0018330Hsp70 protein-domain containing protein; Belongs to the heat shock protein 70 family. (627 aa)
BN2166_0003970annotation not available (1074 aa)
BN2166_0021640FGENESH: predicted gene_3.615 protein. (414 aa)
BN2166_0030950Uncharacterized protein. (189 aa)
BN2166_0024440Endo/exonuclease/phosphatase domain-containing protein. (387 aa)
BN2166_0007370Modifier of rudimentary (Mod(R)) protein-domain containing protein. (180 aa)
BN2166_0022080BY PROTMAP: gi|814541299|emb|CEQ41283.1| SPOSA6832_02986, partial [Sporidiobolus salmonicolor]; Belongs to the small GTPase superfamily. Arf family. (158 aa)
BN2166_0022280Uncharacterized protein. (171 aa)
BN2166_0022330annotation not available (241 aa)
BN2166_0034250FGENESH: predicted gene_6.347 protein. (1510 aa)
BN2166_0023010annotation not available (1438 aa)
BN2166_0036500FGENESH: predicted gene_7.35 protein. (205 aa)
BN2166_0037050Uncharacterized protein. (754 aa)
BN2166_0011720GINS complex, Psf3 component. (180 aa)
BN2166_0026330FGENESH: predicted gene_5.178 protein. (235 aa)
BN2166_0026380FGENESH: predicted gene_5.183 protein; Belongs to the small GTPase superfamily. Arf family. (236 aa)
BN2166_0013020BY PROTMAP: gi|647394646|emb|CDR35879.1| RHTO0S01e09252g1_1 [Rhodosporidium toruloides]. (889 aa)
BN2166_0032390Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family. (246 aa)
BN2166_0040550Uncharacterized protein. (444 aa)
BN2166_0073170BY PROTMAP: gi|647395232|emb|CDR36495.1| RHTO0S02e02938g1_1 [Rhodosporidium toruloides]. (235 aa)
BN2166_0015670FGENESH: predicted gene_3.18 protein. (105 aa)
BN2166_0041150annotation not available (982 aa)
BN2166_0034090BY PROTMAP: gi|342319696|gb|EGU11643.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (1643 aa)
BN2166_0016320BY PROTMAP: gi|647400273|emb|CDR45592.1| RHTO0S11e02366g1_1 [Rhodosporidium toruloides]. (764 aa)
BN2166_0034790Magnesium transporter. (576 aa)
BN2166_0017170FGENESH: predicted gene_3.168 protein. (1174 aa)
BN2166_0035940annotation not available (618 aa)
BN2166_0032130BY PROTMAP: gi|595441971|gb|EXX54114.1| Ypt7p [Rhizophagus irregularis DAOM 197198w]. (183 aa)
BN2166_0032480annotation not available (416 aa)
BN2166_0044200Vacuolar assembly protein DID2. (207 aa)
BN2166_0044350Snf7-domain containing protein. (220 aa)
BN2166_0032360BY PROTMAP: gi|342319630|gb|EGU11577.1| Small Rab GTPase Rab7a [Rhodotorula glutinis ATCC 204091]. (447 aa)
BN2166_0019820Rab-GTPase-TBC domain-domain containing protein. (738 aa)
BN2166_0045250AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (978 aa)
BN2166_0045350annotation not available (343 aa)
BN2166_0020720Vacuolar protein sorting-associated protein 26-domain containing protein. (352 aa)
BN2166_0038540Zn(2)-C6 fungal-type domain-containing protein. (638 aa)
BN2166_0021120FGENESH: predicted gene_3.563 protein. (168 aa)
BN2166_0035210annotation not available (714 aa)
BN2166_0047700annotation not available (1022 aa)
BN2166_0037160BY PROTMAP: gi|342320542|gb|EGU12482.1| Parotid hormone [Rhodotorula glutinis ATCC 204091]. (1363 aa)
BN2166_0041140Protein phosphatase; Belongs to the PP2C family. (412 aa)
BN2166_0038180E3 ubiquitin-protein ligase. (820 aa)
BN2166_0038930BY PROTMAP: gi|814542916|emb|CEQ39947.1| SPOSA6832_01515, partial [Sporidiobolus salmonicolor]; Belongs to the adaptor complexes medium subunit family. (478 aa)
BN2166_0042890Uncharacterized protein. (218 aa)
BN2166_0039360annotation not available (635 aa)
BN2166_0026320Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1662 aa)
BN2166_0027220FGENESH: predicted gene_5.267 protein. (381 aa)
BN2166_0051700F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. (290 aa)
BN2166_0051900FGENESH: predicted gene_10.27 protein. (472 aa)
BN2166_0052600Uncharacterized protein. (1201 aa)
BN2166_0041410BolA-like protein-domain containing protein; Belongs to the BolA/IbaG family. (138 aa)
BN2166_0046540annotation not available (316 aa)
BN2166_0054450annotation not available (1450 aa)
BN2166_0055100annotation not available (988 aa)
BN2166_0056550Rho type ras-related small GTPase. (194 aa)
BN2166_0056950annotation not available (510 aa)
BN2166_0057050BRO1-like domain-domain containing protein. (965 aa)
BN2166_0057400annotation not available (1157 aa)
BN2166_0032370annotation not available (659 aa)
BN2166_0034270AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (732 aa)
BN2166_0052690BY PROTMAP: gi|342319238|gb|EGU11188.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (719 aa)
BN2166_0048210Protein phosphatase; Belongs to the PP2C family. (598 aa)
BN2166_0060650annotation not available (2083 aa)
BN2166_0051280FGENESH: predicted gene_9.474 protein. (799 aa)
BN2166_0049210Heat shock protein; Belongs to the heat shock protein 70 family. (629 aa)
BN2166_0037270Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (2243 aa)
BN2166_0055140annotation not available (583 aa)
BN2166_0062000annotation not available (729 aa)
BN2166_0038120Uncharacterized protein. (208 aa)
BN2166_0050910annotation not available (215 aa)
BN2166_0056190annotation not available (785 aa)
BN2166_0056790Putative electron transfer flavo protein beta chain. (260 aa)
BN2166_0039620BY PROTMAP: gi|342320443|gb|EGU12383.1| Spt3 [Rhodotorula glutinis ATCC 204091]. (421 aa)
BN2166_0056940annotation not available (509 aa)
BN2166_0054830annotation not available (221 aa)
BN2166_0064400BY PROTMAP: gi|342319556|gb|EGU11504.1| GTP-binding protein RAB5 [Rhodotorula glutinis ATCC 204091]. (211 aa)
BN2166_0064700annotation not available (235 aa)
BN2166_0041070BY PROTMAP: gi|342320391|gb|EGU12331.1| Utr2p [Rhodotorula glutinis ATCC 204091]. (634 aa)
BN2166_0066400annotation not available (857 aa)
BN2166_0060440P-loop containing nucleoside triphosphate hydrolase protein. (253 aa)
BN2166_0057630FGENESH: predicted gene_11.259 protein. (81 aa)
BN2166_0061940Actin-related protein 2/3 complex subunit 5; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Arp2/3 complex plays a critical role in the control of cell morphogenesis via the modulation of cell polarity development. (168 aa)
BN2166_0061990annotation not available (1045 aa)
BN2166_0063540annotation not available (577 aa)
BN2166_0064540BY PROTMAP: gi|342319067|gb|EGU11019.1| putative F-actin capping [Rhodotorula glutinis ATCC 204091]; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. (421 aa)
BN2166_0046370Uncharacterized protein. (1335 aa)
BN2166_0063030annotation not available (696 aa)
BN2166_0063130AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (709 aa)
BN2166_0066290Reverse transcriptase domain-containing protein. (288 aa)
BN2166_0048570FGENESH: predicted gene_9.203 protein. (308 aa)
BN2166_0065230Belongs to the STXBP/unc-18/SEC1 family. (936 aa)
BN2166_0068090annotation not available (327 aa)
BN2166_0064410annotation not available (530 aa)
BN2166_0066330FGENESH: predicted gene_14.183 protein. (234 aa)
BN2166_0067480Uncharacterized protein. (701 aa)
BN2166_0070890annotation not available (776 aa)
BN2166_0053870annotation not available (442 aa)
BN2166_0069730Arp2/3 complex 34 kDa subunit; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. (315 aa)
BN2166_0073290BY PROTMAP: gi|647395139|emb|CDR36340.1| RHTO0S02e00650g1_1 [Rhodosporidium toruloides]. (701 aa)
BN2166_0073340annotation not available (999 aa)
BN2166_0074440annotation not available (1033 aa)
BN2166_0073080Uncharacterized protein; Belongs to the AAA ATPase family. (442 aa)
BN2166_0057620BY PROTMAP: gi|323338896|gb|EGA80110.1| Ssa1p [Saccharomyces cerevisiae Vin13]. (383 aa)
BN2166_0073380annotation not available (321 aa)
BN2166_0060320ADP-ribosylation factor 3; Belongs to the small GTPase superfamily. Arf family. (184 aa)
BN2166_0062520Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (1001 aa)
BN2166_0063570annotation not available (628 aa)
BN2166_0069970Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1162 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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