STRINGSTRING
BN2166_0035070 BN2166_0035070 BN2166_0048460 BN2166_0048460 BN2166_0049360 BN2166_0049360 BN2166_0054440 BN2166_0054440 BN2166_0064400 BN2166_0064400 BN2166_0042970 BN2166_0042970 BN2166_0044320 BN2166_0044320 BN2166_0059510 BN2166_0059510 BN2166_0066940 BN2166_0066940 BN2166_0067280 BN2166_0067280 BN2166_0068260 BN2166_0068260 BN2166_0071280 BN2166_0071280 BN2166_0056420 BN2166_0056420 BN2166_0073410 BN2166_0073410 BN2166_0070220 BN2166_0070220 BN2166_0052390 BN2166_0052390 BN2166_0043820 BN2166_0043820 BN2166_0058390 BN2166_0058390 BN2166_0067750 BN2166_0067750 BN2166_0005550 BN2166_0005550 BN2166_0011400 BN2166_0011400 BN2166_0001060 BN2166_0001060 BN2166_0003030 BN2166_0003030 BN2166_0007540 BN2166_0007540 BN2166_0020150 BN2166_0020150 BN2166_0021000 BN2166_0021000 BN2166_0014940 BN2166_0014940 BN2166_0011410 BN2166_0011410 BN2166_0014930 BN2166_0014930 BN2166_0001070 BN2166_0001070 BN2166_0002520 BN2166_0002520 BN2166_0017730 BN2166_0017730 BN2166_0003370 BN2166_0003370 BN2166_0004520 BN2166_0004520 BN2166_0004720 BN2166_0004720 BN2166_0020430 BN2166_0020430 BN2166_0020560 BN2166_0020560 BN2166_0021480 BN2166_0021480 BN2166_0024010 BN2166_0024010 BN2166_0027990 BN2166_0027990 BN2166_0038450 BN2166_0038450 BN2166_0026930 BN2166_0026930 BN2166_0014670 BN2166_0014670 BN2166_0029230 BN2166_0029230 BN2166_0041550 BN2166_0041550 BN2166_0032130 BN2166_0032130 BN2166_0032360 BN2166_0032360 BN2166_0035210 BN2166_0035210 BN2166_0038080 BN2166_0038080 BN2166_0027520 BN2166_0027520 BN2166_0041060 BN2166_0041060 BN2166_0041560 BN2166_0041560 BN2166_0030370 BN2166_0030370 BN2166_0055550 BN2166_0055550 BN2166_0032370 BN2166_0032370 BN2166_0033820 BN2166_0033820 BN2166_0047560 BN2166_0047560
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0035070BY PROTMAP: gi|814543193|emb|CEQ39570.1| SPOSA6832_01126, partial [Sporidiobolus salmonicolor]. (280 aa)
BN2166_0048460annotation not available (606 aa)
BN2166_0049360Snare protein syntaxin 18/UFE1. (393 aa)
BN2166_0054440ATPase, V1/A1 complex, subunit E. (223 aa)
BN2166_0064400BY PROTMAP: gi|342319556|gb|EGU11504.1| GTP-binding protein RAB5 [Rhodotorula glutinis ATCC 204091]. (211 aa)
BN2166_0042970Mannose-6-phosphate receptor binding domain-containing protein. (342 aa)
BN2166_0044320annotation not available (655 aa)
BN2166_0059510annotation not available (1111 aa)
BN2166_0066940V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (159 aa)
BN2166_0067280Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family. (506 aa)
BN2166_0068260FGENESH: predicted gene_15.107 protein. (1346 aa)
BN2166_0071280FGENESH: predicted gene_16.154 protein. (705 aa)
BN2166_0056420Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (448 aa)
BN2166_0073410Uncharacterized protein. (596 aa)
BN2166_0070220Belongs to the V-ATPase proteolipid subunit family. (191 aa)
BN2166_0052390Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. (98 aa)
BN2166_0043820V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (120 aa)
BN2166_0058390Mitochondrial import inner membrane translocase subunit TIM9. (91 aa)
BN2166_0067750V-type proton ATPase subunit; Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. The active enzyme consists of a catalytic V1 domain attached to an integral membrane V0 proton pore complex. This subunit is a non-integral membrane component of the membrane pore domain and is required for proper assembly of the V0 sector. Might be involved in the regulated assembly of V1 subunits onto the membrane sector or alternatively may prevent the passage of protons through V0 pores; Belongs to the V-ATPase V0D/AC39 subunit family. (364 aa)
BN2166_0005550annotation not available (525 aa)
BN2166_0011400Protein-S-isoprenylcysteine O-methyltransferase; Belongs to the class VI-like SAM-binding methyltransferase superfamily. Isoprenylcysteine carboxyl methyltransferase family. (1433 aa)
BN2166_0001060FGENESH: predicted gene_1.106 protein. (263 aa)
BN2166_0003030Phosphatidylinositol 3-kinase VPS34. (894 aa)
BN2166_0007540V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (470 aa)
BN2166_0020150BY PROTMAP: gi|342320140|gb|EGU12083.1| NADPH oxidase isoform 1 [Rhodotorula glutinis ATCC 204091]. (573 aa)
BN2166_0021000Protein transporter SEC61 subunit alpha, variant; Belongs to the SecY/SEC61-alpha family. (475 aa)
BN2166_0014940Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (316 aa)
BN2166_0011410Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (432 aa)
BN2166_0014930FGENESH: predicted gene_2.662 protein. (94 aa)
BN2166_0001070BY PROTMAP: gi|342320634|gb|EGU12573.1| putative Motor [Rhodotorula glutinis ATCC 204091]. (4364 aa)
BN2166_0002520BY PROTMAP: gi|472583514|gb|EMS21147.1| ferric-chelate reductase [Rhodosporidium toruloides NP11]. (657 aa)
BN2166_0017730FAD-binding FR-type domain-containing protein. (637 aa)
BN2166_0003370annotation not available (744 aa)
BN2166_0004520annotation not available (492 aa)
BN2166_0004720BY PROTMAP: gi|647396351|emb|CDR38455.1| RHTO0S03e09692g1_1 [Rhodosporidium toruloides]. (582 aa)
BN2166_0020430Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
BN2166_0020560Tr-type G domain-containing protein. (944 aa)
BN2166_0021480BY PROTMAP: gi|342321683|gb|EGU13615.1| F-box domain protein [Rhodotorula glutinis ATCC 204091]. (595 aa)
BN2166_0024010P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family. (503 aa)
BN2166_0027990annotation not available (2464 aa)
BN2166_0038450annotation not available (631 aa)
BN2166_0026930Putative cytoplasm protein. (767 aa)
BN2166_0014670annotation not available (652 aa)
BN2166_0029230EGF-like domain-containing protein. (1093 aa)
BN2166_0041550annotation not available (652 aa)
BN2166_0032130BY PROTMAP: gi|595441971|gb|EXX54114.1| Ypt7p [Rhizophagus irregularis DAOM 197198w]. (183 aa)
BN2166_0032360BY PROTMAP: gi|342319630|gb|EGU11577.1| Small Rab GTPase Rab7a [Rhodotorula glutinis ATCC 204091]. (447 aa)
BN2166_0035210annotation not available (714 aa)
BN2166_0038080V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. (859 aa)
BN2166_0027520annotation not available (189 aa)
BN2166_0041060Presequence translocated-associated motor subunit PAM17. (204 aa)
BN2166_0041560annotation not available (345 aa)
BN2166_0030370Uncharacterized protein; Belongs to the synaptobrevin family. (230 aa)
BN2166_0055550V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (148 aa)
BN2166_0032370annotation not available (659 aa)
BN2166_0033820Putative ferric reductase transmembrane component. (723 aa)
BN2166_0047560V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (143 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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