STRINGSTRING
SMAX5B_004131 SMAX5B_004131 ENSSMAP00000001934 ENSSMAP00000001934 SMAX5B_001282 SMAX5B_001282 SMAX5B_018911 SMAX5B_018911 SMAX5B_017158 SMAX5B_017158
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMAX5B_004131Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (132 aa)
ENSSMAP00000001934Polymerase (RNA) II (DNA directed) polypeptide G-like. (203 aa)
SMAX5B_001282DNA-directed RNA polymerase II subunit RPB3 isoform 2. (340 aa)
SMAX5B_018911Transcription elongation factor SPT5. (1066 aa)
SMAX5B_017158DNA-directed RNA polymerase II subunit RPB4. (112 aa)
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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