5 items (Scophthalmus maximus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RSPH1	Putative MORN repeat-containing protein 1. (275 aa)
	SMAX5B_009648	Putative radial spoke head protein 6-like A-like. (512 aa)
	SMAX5B_008209	Putative radial spoke head protein 9-like. (277 aa)
	SMAX5B_019784	Putative coiled-coil domain-containing protein 40. (974 aa)
	SMAX5B_020697	Putative leucine-rich repeat-containing protein 48. (453 aa)

Your Current Organism:

Scophthalmus maximus

NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RSPH1	SMAX5B_008209	ENSSMAP00000004416	ENSSMAP00000015227	Putative MORN repeat-containing protein 1.	Putative radial spoke head protein 9-like.	0.946
RSPH1	SMAX5B_009648	ENSSMAP00000004416	ENSSMAP00000006990	Putative MORN repeat-containing protein 1.	Putative radial spoke head protein 6-like A-like.	0.954
RSPH1	SMAX5B_019784	ENSSMAP00000004416	ENSSMAP00000019094	Putative MORN repeat-containing protein 1.	Putative coiled-coil domain-containing protein 40.	0.616
SMAX5B_008209	RSPH1	ENSSMAP00000015227	ENSSMAP00000004416	Putative radial spoke head protein 9-like.	Putative MORN repeat-containing protein 1.	0.946
SMAX5B_008209	SMAX5B_009648	ENSSMAP00000015227	ENSSMAP00000006990	Putative radial spoke head protein 9-like.	Putative radial spoke head protein 6-like A-like.	0.974
SMAX5B_008209	SMAX5B_019784	ENSSMAP00000015227	ENSSMAP00000019094	Putative radial spoke head protein 9-like.	Putative coiled-coil domain-containing protein 40.	0.521
SMAX5B_008209	SMAX5B_020697	ENSSMAP00000015227	ENSSMAP00000023461	Putative radial spoke head protein 9-like.	Putative leucine-rich repeat-containing protein 48.	0.470
SMAX5B_009648	RSPH1	ENSSMAP00000006990	ENSSMAP00000004416	Putative radial spoke head protein 6-like A-like.	Putative MORN repeat-containing protein 1.	0.954
SMAX5B_009648	SMAX5B_008209	ENSSMAP00000006990	ENSSMAP00000015227	Putative radial spoke head protein 6-like A-like.	Putative radial spoke head protein 9-like.	0.974
SMAX5B_009648	SMAX5B_019784	ENSSMAP00000006990	ENSSMAP00000019094	Putative radial spoke head protein 6-like A-like.	Putative coiled-coil domain-containing protein 40.	0.615
SMAX5B_009648	SMAX5B_020697	ENSSMAP00000006990	ENSSMAP00000023461	Putative radial spoke head protein 6-like A-like.	Putative leucine-rich repeat-containing protein 48.	0.877
SMAX5B_019784	RSPH1	ENSSMAP00000019094	ENSSMAP00000004416	Putative coiled-coil domain-containing protein 40.	Putative MORN repeat-containing protein 1.	0.616
SMAX5B_019784	SMAX5B_008209	ENSSMAP00000019094	ENSSMAP00000015227	Putative coiled-coil domain-containing protein 40.	Putative radial spoke head protein 9-like.	0.521
SMAX5B_019784	SMAX5B_009648	ENSSMAP00000019094	ENSSMAP00000006990	Putative coiled-coil domain-containing protein 40.	Putative radial spoke head protein 6-like A-like.	0.615
SMAX5B_019784	SMAX5B_020697	ENSSMAP00000019094	ENSSMAP00000023461	Putative coiled-coil domain-containing protein 40.	Putative leucine-rich repeat-containing protein 48.	0.836
SMAX5B_020697	SMAX5B_008209	ENSSMAP00000023461	ENSSMAP00000015227	Putative leucine-rich repeat-containing protein 48.	Putative radial spoke head protein 9-like.	0.470
SMAX5B_020697	SMAX5B_009648	ENSSMAP00000023461	ENSSMAP00000006990	Putative leucine-rich repeat-containing protein 48.	Putative radial spoke head protein 6-like A-like.	0.877
SMAX5B_020697	SMAX5B_019784	ENSSMAP00000023461	ENSSMAP00000019094	Putative leucine-rich repeat-containing protein 48.	Putative coiled-coil domain-containing protein 40.	0.836