11 items (Scophthalmus maximus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSMAP00000033142	annotation not available (124 aa)
	SMAX5B_010163	Dynein assembly factor 1, axonemal. (594 aa)
	SMAX5B_015638	Putative tektin-2. (443 aa)
	SMAX5B_015431	Putative dyslexia susceptibility 1 candidate 1 protein-like. (417 aa)
	SMAX5B_002296	Putative zinc finger MYND domain-containing protein 10. (450 aa)
	DNAAF5	Putative HEAT repeat-containing protein 2. (845 aa)
	SMAX5B_019187	Putative coiled-coil domain-containing protein 37. (577 aa)
	SMAX5B_012848	Putative coiled-coil domain-containing protein 103-like isoform 2. (83 aa)
	ENSSMAP00000017271	annotation not available (303 aa)
	SMAX5B_007178	PIH1_CS domain-containing protein. (198 aa)
	SMAX5B_006302	Putative coiled-coil domain-containing protein 39. (898 aa)

Your Current Organism:

Scophthalmus maximus

NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DNAAF5	ENSSMAP00000017271	ENSSMAP00000026205	ENSSMAP00000017271	Putative HEAT repeat-containing protein 2.	annotation not available	0.465
DNAAF5	ENSSMAP00000033142	ENSSMAP00000026205	ENSSMAP00000033142	Putative HEAT repeat-containing protein 2.	annotation not available	0.404
DNAAF5	SMAX5B_002296	ENSSMAP00000026205	ENSSMAP00000026229	Putative HEAT repeat-containing protein 2.	Putative zinc finger MYND domain-containing protein 10.	0.465
DNAAF5	SMAX5B_006302	ENSSMAP00000026205	ENSSMAP00000013451	Putative HEAT repeat-containing protein 2.	Putative coiled-coil domain-containing protein 39.	0.551
DNAAF5	SMAX5B_007178	ENSSMAP00000026205	ENSSMAP00000015148	Putative HEAT repeat-containing protein 2.	PIH1_CS domain-containing protein.	0.516
DNAAF5	SMAX5B_010163	ENSSMAP00000026205	ENSSMAP00000033144	Putative HEAT repeat-containing protein 2.	Dynein assembly factor 1, axonemal.	0.404
DNAAF5	SMAX5B_012848	ENSSMAP00000026205	ENSSMAP00000018933	Putative HEAT repeat-containing protein 2.	Putative coiled-coil domain-containing protein 103-like isoform 2.	0.518
DNAAF5	SMAX5B_015431	ENSSMAP00000026205	ENSSMAP00000028904	Putative HEAT repeat-containing protein 2.	Putative dyslexia susceptibility 1 candidate 1 protein-like.	0.501
ENSSMAP00000017271	DNAAF5	ENSSMAP00000017271	ENSSMAP00000026205	annotation not available	Putative HEAT repeat-containing protein 2.	0.465
ENSSMAP00000017271	ENSSMAP00000033142	ENSSMAP00000017271	ENSSMAP00000033142	annotation not available	annotation not available	0.432
ENSSMAP00000017271	SMAX5B_006302	ENSSMAP00000017271	ENSSMAP00000013451	annotation not available	Putative coiled-coil domain-containing protein 39.	0.485
ENSSMAP00000017271	SMAX5B_007178	ENSSMAP00000017271	ENSSMAP00000015148	annotation not available	PIH1_CS domain-containing protein.	0.416
ENSSMAP00000017271	SMAX5B_010163	ENSSMAP00000017271	ENSSMAP00000033144	annotation not available	Dynein assembly factor 1, axonemal.	0.532
ENSSMAP00000017271	SMAX5B_012848	ENSSMAP00000017271	ENSSMAP00000018933	annotation not available	Putative coiled-coil domain-containing protein 103-like isoform 2.	0.452
ENSSMAP00000017271	SMAX5B_015431	ENSSMAP00000017271	ENSSMAP00000028904	annotation not available	Putative dyslexia susceptibility 1 candidate 1 protein-like.	0.544
ENSSMAP00000033142	DNAAF5	ENSSMAP00000033142	ENSSMAP00000026205	annotation not available	Putative HEAT repeat-containing protein 2.	0.404
ENSSMAP00000033142	ENSSMAP00000017271	ENSSMAP00000033142	ENSSMAP00000017271	annotation not available	annotation not available	0.432
ENSSMAP00000033142	SMAX5B_002296	ENSSMAP00000033142	ENSSMAP00000026229	annotation not available	Putative zinc finger MYND domain-containing protein 10.	0.432
ENSSMAP00000033142	SMAX5B_006302	ENSSMAP00000033142	ENSSMAP00000013451	annotation not available	Putative coiled-coil domain-containing protein 39.	0.497
ENSSMAP00000033142	SMAX5B_012848	ENSSMAP00000033142	ENSSMAP00000018933	annotation not available	Putative coiled-coil domain-containing protein 103-like isoform 2.	0.454