STRINGSTRING
Psta_1850 Psta_1850 Psta_1851 Psta_1851 Psta_2818 Psta_2818 Psta_2819 Psta_2819 Psta_2820 Psta_2820 Psta_4226 Psta_4226
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Psta_1850PFAM: Methyltransferase type 12; Methyltransferase type 11; UbiE/COQ5 methyltransferase; KEGG: BTA1; diacylglyceryl-N,N,N- trimethylhomoserine synthesis protein. (243 aa)
Psta_1851S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase-like protein; KEGG: YALI0E10197p. (396 aa)
Psta_2818PFAM: peptidase C39 bacteriocin processing; KEGG: hhe:HH0187 hypothetical protein. (238 aa)
Psta_2819KEGG: ppd:Ppro_2173 hypothetical protein. (523 aa)
Psta_2820KEGG: hypothetical protein. (478 aa)
Psta_4226KEGG: dps:DP1707 hypothetical protein. (250 aa)
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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