STRINGSTRING
Psta_4761 Psta_4761 Psta_3682 Psta_3682 Psta_3936 Psta_3936 rny rny Psta_4015 Psta_4015 glnD glnD Psta_4624 Psta_4624 Psta_4687 Psta_4687 Psta_0818 Psta_0818 Psta_0926 Psta_0926 Psta_2527 Psta_2527 Psta_2533 Psta_2533 Psta_2798 Psta_2798 Psta_2885 Psta_2885
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Psta_4761PFAM: metal-dependent phosphohydrolase HD sub domain; nucleic acid binding OB-fold tRNA/helicase-type; SMART: metal-dependent phosphohydrolase HD region; KEGG: dvl:Dvul_1091 metal dependent phosphohydrolase. (334 aa)
Psta_3682PFAM: Metal-dependent hydrolase HDOD; metal- dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: glo:Glov_3214 metal dependent phosphohydrolase. (299 aa)
Psta_3936PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: mgm:Mmc1_1624 metal dependent phosphohydrolase. (470 aa)
rnyRNA binding metal dependent phosphohydrolase; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. (519 aa)
Psta_4015Diguanylate cyclase and metal dependent phosphohydrolase; KEGG: gbm:Gbem_2068 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; metal- dependent phosphohydrolase HD sub domain; PAS fold-4 domain protein; PAS fold domain protein; SMART: GGDEF domain containing protein; metal- dependent phosphohydrolase HD region; PAS domain containing protein. (779 aa)
glnDUTP-GlnB uridylyltransferase, GlnD; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism. (885 aa)
Psta_4624TIGRFAM: phosphonate degradation operons associated HDIG domain protein; KEGG: cak:Caul_2988 hypothetical protein. (189 aa)
Psta_4687PFAM: metal-dependent phosphohydrolase HD sub domain; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: aba:Acid345_4294 metal dependent phosphohydrolase. (324 aa)
Psta_0818PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: response regulator receiver; metal-dependent phosphohydrolase HD region; KEGG: mgm:Mmc1_3072 response regulator receiver modulated metal dependent phosphohydrolase. (347 aa)
Psta_0926KEGG: glo:Glov_1582 deoxyguanosinetriphosphate triphosphohydrolase; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; Belongs to the dGTPase family. Type 2 subfamily. (401 aa)
Psta_2527PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: tmz:Tmz1t_2132 metal dependent phosphohydrolase. (220 aa)
Psta_2533KEGG: gur:Gura_1781 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region. (783 aa)
Psta_2798PFAM: metal-dependent phosphohydrolase HD sub domain; Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region; KEGG: gme:Gmet_2559 metal dependent phosphohydrolase. (549 aa)
Psta_2885PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: bsu:BSU37600 hypothetical protein. (443 aa)
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.