STRINGSTRING
SDE03902.1 SDE03902.1 valS valS SDC29590.1 SDC29590.1 nadD nadD SDC03674.1 SDC03674.1 cysH cysH SDC06257.1 SDC06257.1 SDC10798.1 SDC10798.1 mnmA mnmA gltX gltX SDC42063.1 SDC42063.1 coaD coaD SDC50162.1 SDC50162.1 SDC56124.1 SDC56124.1 SDC73753.1 SDC73753.1 guaA guaA tilS tilS panC panC cysS cysS SDC91535.1 SDC91535.1 mshC mshC leuS leuS SDD29997.1 SDD29997.1 SDD32108.1 SDD32108.1 SDD33781.1 SDD33781.1 SDD33800.1 SDD33800.1 argS argS SDD42890.1 SDD42890.1 ileS ileS thiI thiI SDD62857.1 SDD62857.1 SDD63586.1 SDD63586.1 SDD58170.1 SDD58170.1 SDD58197.1 SDD58197.1 SDD58290.1 SDD58290.1 SDD58415.1 SDD58415.1 SDD58838.1 SDD58838.1 SDD69998.1 SDD69998.1 metG metG trpS trpS SDD72849.1 SDD72849.1 argG argG tyrS tyrS SDD95315.1 SDD95315.1 nadE nadE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SDE03902.1Asparagine synthase (glutamine-hydrolysing). (510 aa)
valSvalyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. (877 aa)
SDC29590.1Nucleotide-binding universal stress protein, UspA family. (304 aa)
nadDNicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). (197 aa)
SDC03674.1Sulfate adenylyltransferase subunit 2. (306 aa)
cysHPhosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. (238 aa)
SDC06257.1Uncharacterized SAM-binding protein YcdF, DUF218 family. (222 aa)
SDC10798.1Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family. (303 aa)
mnmAtRNA-specific 2-thiouridylase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. (363 aa)
gltXglutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. (493 aa)
SDC42063.1Asparagine synthase (glutamine-hydrolysing). (574 aa)
coaDPhosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. (162 aa)
SDC50162.1Two-component system, OmpR family, sensor histidine kinase KdpD. (846 aa)
SDC56124.1Asparagine synthase (glutamine-hydrolysing). (642 aa)
SDC73753.1Asparagine synthase (glutamine-hydrolysing). (637 aa)
guaAGMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. (514 aa)
tilStRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family. (328 aa)
panCPantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. (304 aa)
cysScysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (435 aa)
SDC91535.1Sulfate adenylyltransferase subunit 2. (303 aa)
mshCL-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily. (412 aa)
leuSleucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (952 aa)
SDD29997.1Nucleotide-binding universal stress protein, UspA family. (298 aa)
SDD32108.1Nucleotide-binding universal stress protein, UspA family. (149 aa)
SDD33781.1Electron transfer flavoprotein beta subunit. (261 aa)
SDD33800.1Electron transfer flavoprotein alpha subunit. (319 aa)
argSarginyl-tRNA synthetase. (573 aa)
SDD42890.1Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family. (446 aa)
ileSisoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily. (1058 aa)
thiIThiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. (405 aa)
SDD62857.1Asparagine synthase (glutamine-hydrolysing). (605 aa)
SDD63586.1DUF218 domain-containing protein. (132 aa)
SDD58170.1Nucleotide-binding universal stress protein, UspA family. (304 aa)
SDD58197.1Nucleotide-binding universal stress protein, UspA family. (303 aa)
SDD58290.1Nucleotide-binding universal stress protein, UspA family. (312 aa)
SDD58415.1Nucleotide-binding universal stress protein, UspA family. (336 aa)
SDD58838.1cysteinyl-tRNA synthetase. (381 aa)
SDD69998.1DUF218 domain-containing protein. (224 aa)
metGmethionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. (598 aa)
trpStryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. (342 aa)
SDD72849.1tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (348 aa)
argGArgininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. (400 aa)
tyrStyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily. (424 aa)
SDD95315.1Asparagine synthase (glutamine-hydrolysing). (600 aa)
nadENAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. (574 aa)
Your Current Organism:
Prauserella marina
NCBI taxonomy Id: 530584
Other names: CCTCC AA 208056, DSM 45268, Prauserella marina Wang et al. 2010, Prauserella sp. Ms498, strain MS498
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