STRINGSTRING
gcvT_1 gcvT_1 stcD_2 stcD_2 ANI18205.1 ANI18205.1 ANI18505.1 ANI18505.1 gcvT_5 gcvT_5 ANI15611.1 ANI15611.1 soxB_2 soxB_2 soxB_1 soxB_1 ANI12575.1 ANI12575.1 ANI12573.1 ANI12573.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gcvT_1Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family. (1006 aa)
stcD_2N-methylproline demethylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (686 aa)
ANI18205.1(Fe-S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (655 aa)
ANI18505.1Sarcosine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family. (196 aa)
gcvT_5Aminomethyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family. (967 aa)
ANI15611.1Sarcosine oxidase subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. (98 aa)
soxB_2Sarcosine oxidase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (413 aa)
soxB_1Sarcosine oxidase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (416 aa)
ANI12575.1Sarcosine oxidase subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. (107 aa)
ANI12573.1Sarcosine oxidase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology. (211 aa)
Your Current Organism:
Pseudomonas citronellolis
NCBI taxonomy Id: 53408
Other names: ATCC 13674, CCUG 17933, CFBP 5585, CIP 104381, DSM 50332, IAM 15129, JCM 21587, LMG 18378, LMG:18378, NBRC 103043, NRRL B-2504, P. citronellolis
Server load: low (12%) [HD]