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| | rpsN | Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. (101 aa) |
| | rpsO | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. (89 aa) |
| | recR | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (201 aa) |
| | AEH84556.1 | Conserved hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (107 aa) |
| | AEH84788.1 | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. (565 aa) |
| | AEH84792.1 | Transcriptional regulator, TetR family; InterPro IPR001647; KEGG: mlo:mlr5206 transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family. (224 aa) |
| | gyrB | DNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (823 aa) |
| | rpmI | COGs: COG0291 Ribosomal protein L35; InterPro IPR001706:IPR018265; KEGG: mlo:msl5059 50S ribosomal protein L35; PFAM: ribosomal protein L35; SPTR: 50S ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. (67 aa) |
| | rplT | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (133 aa) |
| | AEH84923.1 | Glutathione-dependent formaldehyde-activating GFA; COGs: COG3791 conserved hypothetical protein; InterPro IPR006913; KEGG: mlo:mll5054 hypothetical protein; PFAM: glutathione-dependent formaldehyde-activating GFA; SPTR: Glutathione-dependent formaldehyde-activating GFA; PFAM: Glutathione-dependent formaldehyde-activating enzyme. (140 aa) |
| | AEH85051.1 | Class II aldolase/adducin family protein; COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase; InterPro IPR001303; KEGG: mlo:mll4933 hypothetical protein; PFAM: class II aldolase/adducin family protein; SPTR: Class II aldolase/adducin family protein; PFAM: Class II Aldolase and Adducin N-terminal domain. (255 aa) |
| | AEH85101.1 | Glutathione-dependent formaldehyde-activating GFA; COGs: COG3791 conserved hypothetical protein; InterPro IPR006913; KEGG: mlo:mll4859 hypothetical protein; PFAM: glutathione-dependent formaldehyde-activating GFA; SPTR: Glutathione-dependent formaldehyde-activating GFA; PFAM: Glutathione-dependent formaldehyde-activating enzyme. (134 aa) |
| | AEH85121.1 | Transcriptional regulator, TetR family; InterPro IPR001647; KEGG: mlo:mlr4833 transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family. (210 aa) |
| | AEH85135.1 | Transcriptional regulator, TetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: mlo:mll4816 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family. (244 aa) |
| | AEH87949.1 | Transcriptional regulator, TetR family; InterPro IPR001647; KEGG: mlo:mll1598 transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Probable transcriptional regulator; manually curated; PFAM: Bacterial regulatory proteins, tetR family. (213 aa) |
| | AEH87992.1 | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. (557 aa) |
| | AEH88044.1 | Transcriptional regulator, TetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: mlo:mlr1472 transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family. (229 aa) |
| | AEH88096.1 | Transcriptional regulator, TetR family; InterPro IPR001647; KEGG: mlo:mll1406 transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family. (241 aa) |
| | AEH88126.1 | COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; InterPro IPR002023; KEGG: mlo:mll1366 NADH dehydrogenase subunit E; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH-quinone oxidoreductase, E subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit. (426 aa) |
| | AEH88128.1 | NADH-ubiquinone dehydrogenase subunit; COGs: COG3743 conserved hypothetical protein; KEGG: mlo:mll1364 NADH-ubiquinone dehydrogenase subunit; SPTR: NADH-ubiquinone dehydrogenase subunit. (229 aa) |
| | AEH88170.1 | P4 alpha zinc-binding domain protein; InterPro IPR013237; KEGG: mno:Mnod_0613 putative DNA primase; PFAM: P4 alpha zinc-binding domain protein; SPTR: Putative uncharacterized protein; PFAM: Zinc-binding domain of primase-helicase. (447 aa) |
| | AEH88179.1 | Phage/plasmid primase, P4 family; COGs: COG3378 ATPase; InterPro IPR006500:IPR014818:IPR014015; KEGG: bbt:BBta_6606 putative phage / plasmid primase P4; PFAM: primase P4; SPTR: Phage/plasmid primase, P4 family; TIGRFAM: phage/plasmid primase, P4 family; PFAM: D5 N terminal like; TIGRFAM: phage/plasmid primase, P4 family, C-terminal domain. (637 aa) |
| | AEH88489.1 | Transcriptional regulator, TetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: mlo:mlr0908 transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family. (237 aa) |
| | parE | DNA topoisomerase IV, B subunit; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily. (685 aa) |
| | rpsT | Ribosomal protein S20; Binds directly to 16S ribosomal RNA. (88 aa) |
| | AEH90621.1 | Prenyltransferase/squalene oxidase; InterPro IPR001330; KEGG: rhi:NGR_a02760 conserved hypothetical 55.1 kDa protein; PFAM: Prenyltransferase/squalene oxidase; SPTR: Putative uncharacterized protein. (516 aa) |
| | queE | 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. (244 aa) |
| | AEH90538.1 | Protein of unknown function DUF159; COGs: COG2135 conserved hypothetical protein; InterPro IPR003738; KEGG: rlt:Rleg2_2203 protein of unknown function DUF159; PFAM: protein of unknown function DUF159; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised ACR, COG2135; Belongs to the SOS response-associated peptidase family. (239 aa) |
| | AEH90467.1 | Transcriptional regulator, TetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: rlt:Rleg2_0480 transcriptional regulator, TetR family; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family. (203 aa) |
| | AEH90159.1 | Transcriptional regulator, TetR family; InterPro IPR001647; KEGG: mlo:mlr7295 transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family. (202 aa) |
| | AEH90132.1 | Glutathione-dependent formaldehyde-activating GFA; COGs: COG3791 conserved hypothetical protein; InterPro IPR006913; KEGG: rlg:Rleg_5412 glutathione-dependent formaldehyde-activating GFA; PFAM: glutathione-dependent formaldehyde-activating GFA; SPTR: Glutathione-dependent formaldehyde-activating GFA; PFAM: Glutathione-dependent formaldehyde-activating enzyme. (125 aa) |
| | AEH90114.1 | Transcriptional regulator, TetR family; InterPro IPR001647; KEGG: mlo:mlr7359 transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family. (196 aa) |
| | AEH90080.1 | InterPro IPR006913; KEGG: cak:Caul_2758 glutathione-dependent formaldehyde-activating GFA; PFAM: glutathione-dependent formaldehyde-activating GFA; SPTR: Glutathione-dependent formaldehyde-activating GFA. (162 aa) |
| | AEH90041.1 | Transcriptional regulator, TetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: mlo:mlr7466 transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family. (202 aa) |
| | AEH90032.1 | KEGG: mlo:mll7476 hypothetical protein; SPTR: Putative uncharacterized protein. (72 aa) |
| | smc | Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1152 aa) |
| | AEH89955.1 | COGs: COG4451 Ribulose bisphosphate carboxylase small subunit; InterPro IPR000894; KEGG: smd:Smed_3925 ribulose-bisphosphate carboxylase; PFAM: ribulose bisphosphate carboxylase small chain; PRIAM: Ribulose-bisphosphate carboxylase; SPTR: Ribulose-bisphosphate carboxylase; PFAM: Ribulose bisphosphate carboxylase, small chain. (129 aa) |
| | AEH89904.1 | KEGG: zmn:Za10_1714 hypothetical protein; SPTR: Putative uncharacterized protein. (301 aa) |
| | betI-2 | Transcriptional regulator, TetR family; Repressor involved in choline regulation of the bet genes. (196 aa) |
| | AEH89762.1 | Transcriptional regulator, TetR family; InterPro IPR001647; KEGG: mlo:mll7734 transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family. (213 aa) |
| | recO | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. (258 aa) |
| | AEH89712.1 | Protein of unknown function DUF159; COGs: COG2135 conserved hypothetical protein; InterPro IPR003738; KEGG: mlo:mlr7795 hypothetical protein; PFAM: protein of unknown function DUF159; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised ACR, COG2135; Belongs to the SOS response-associated peptidase family. (253 aa) |
| | AEH89706.1 | Glutathione-dependent formaldehyde-activating GFA; COGs: COG3791 conserved hypothetical protein; InterPro IPR006913; KEGG: mlo:mlr7801 hypothetical protein; PFAM: glutathione-dependent formaldehyde-activating GFA; SPTR: Glutathione-dependent formaldehyde-activating GFA; PFAM: Glutathione-dependent formaldehyde-activating enzyme. (163 aa) |
| | AEH89705.1 | Glutathione-dependent formaldehyde-activating GFA; COGs: COG3791 conserved hypothetical protein; InterPro IPR006913; KEGG: mlo:mlr7802 hypothetical protein; PFAM: glutathione-dependent formaldehyde-activating GFA; SPTR: Glutathione-dependent formaldehyde-activating GFA; PFAM: Glutathione-dependent formaldehyde-activating enzyme. (158 aa) |
| | AEH89686.1 | InterPro IPR001647; KEGG: sro:Sros_8904 putative transcriptional regulator, TetR family; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family. (197 aa) |
| | AEH89671.1 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (496 aa) |
| | rplI | Ribosomal protein L9; Binds to the 23S rRNA. (194 aa) |
| | rpsR | Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (82 aa) |
| | rpsF | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. (163 aa) |
| | AEH89646.1 | COGs: COG2927 DNA polymerase III chi subunit; InterPro IPR007459; KEGG: mlo:mlr7869 DNA polymerase III subunit chi; PFAM: DNA polymerase III chi subunit HolC; SPTR: DNA polymerase III chi subunit HolC; PFAM: DNA polymerase III chi subunit, HolC. (149 aa) |
| | AEH89632.1 | Transcriptional regulator, TetR family; InterPro IPR001647; KEGG: mlo:mlr7895 transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family. (193 aa) |
| | betI | Transcriptional regulator, TetR family; Repressor involved in choline regulation of the bet genes. (212 aa) |
| | AEH89545.1 | Transcriptional regulator, TetR family; InterPro IPR001647; KEGG: mlo:mlr8177 transcription regulator; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; manually curated; PFAM: Bacterial regulatory proteins, tetR family. (233 aa) |
| | AEH89529.1 | Transcriptional regulator, TetR family; InterPro IPR001647; KEGG: mlo:mlr8196 transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family. (202 aa) |
| | gfa | S-(hydroxymethyl)glutathione synthase; Catalyzes the condensation of formaldehyde and glutathione to S-hydroxymethylglutathione; Belongs to the Gfa family. (189 aa) |
| | rpmG | Ribosomal protein L33; InterPro IPR001705:IPR018264; KEGG: mlo:msr0848 50S ribosomal protein L33; PFAM: ribosomal protein L33; SPTR: 50S ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type; Belongs to the bacterial ribosomal protein bL33 family. (55 aa) |
| | topA | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (870 aa) |
| | AEH88555.1 | Glutathione-dependent formaldehyde-activating GFA; COGs: COG3791 conserved hypothetical protein; InterPro IPR006913; KEGG: mlo:mll0824 hypothetical protein; PFAM: glutathione-dependent formaldehyde-activating GFA; SPTR: Glutathione-dependent formaldehyde-activating GFA; PFAM: Glutathione-dependent formaldehyde-activating enzyme. (138 aa) |
| | AEH88585.1 | Protein of unknown function DUF924; COGs: COG3803 conserved hypothetical protein; InterPro IPR010323; KEGG: mlo:mlr0784 hypothetical protein; PFAM: protein of unknown function DUF924; SPTR: Putative uncharacterized protein; PFAM: Bacterial protein of unknown function (DUF924). (181 aa) |
| | gyrA | DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (933 aa) |
| | clpS-2 | ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. (122 aa) |
| | rpsB | COGs: COG0052 Ribosomal protein S2; InterPro IPR005706:IPR001865:IPR018130; KEGG: mlo:mll0651 30S ribosomal protein S2; PFAM: ribosomal protein S2; SPTR: Ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type; Belongs to the universal ribosomal protein uS2 family. (260 aa) |
| | AEH88740.1 | Putative circadian clock protein, KaiC; COGs: COG0467 RecA-superfamily ATPase implicated in signal transduction; InterProIPR014774:IPR015140:IPR013503:IPR010624:IPR 003593:IPR004504; KEGG: rca:Rcas_4148 circadian clock protein KaiC; PFAM: Circadian clock protein KaiC central region; KaiA binding; PRIAM: Non-specific serine/threonine protein kinase; SMART: AAA ATPase; SPTR: Putative circadian clock protein, KaiC; TIGRFAM: circadian clock protein KaiC; PFAM: KaiC; TIGRFAM: circadian clock protein KaiC. (495 aa) |
| | AEH88815.1 | ADP-ribosylation/Crystallin J1; InterPro IPR005502; KEGG: mes:Meso_1097 hypothetical protein; PFAM: ADP-ribosylation/Crystallin J1; SPTR: ADP-ribosylation/Crystallin J1; PFAM: ADP-ribosylglycohydrolase. (702 aa) |
| | AEH88894.1 | Transcriptional regulator, TetR family; InterPro IPR001647; KEGG: mlo:mlr0535 transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family. (204 aa) |
| | rplE | Ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (192 aa) |
| | rplX | Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. (104 aa) |
| | rplN | Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (122 aa) |
| | rpsQ | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (79 aa) |
| | rpmC | Ribosomal protein L29; InterPro IPR018254:IPR001854; KEGG: mlo:msr0303 50S ribosomal protein L29; PFAM: ribosomal protein L29; SPTR: Ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. (66 aa) |
| | rplP | Ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. (137 aa) |
| | rpsC | Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (241 aa) |
| | rplV | Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. (129 aa) |
| | rpsS | Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (92 aa) |
| | rplB | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (277 aa) |
| | rplW | Ribosomal protein L25/L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (97 aa) |
| | rplD | Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel. (206 aa) |
| | rplC | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (237 aa) |
| | rpsJ | Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (102 aa) |
| | rpsG | Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (156 aa) |
| | rpsL | Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. (123 aa) |
| | rplL | Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (125 aa) |
| | rplJ | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (172 aa) |
| | rplA | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (232 aa) |
| | rplK | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. (142 aa) |
| | AEH89080.1 | Transcriptional regulator, TetR family; InterPro IPR001647; KEGG: mlo:mlr0237 hypothetical protein; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family. (204 aa) |
| | AEH89086.1 | Transcriptional regulator, TetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: mlo:mlr0230 hypothetical protein; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family. (245 aa) |
| | AEH89095.1 | Glutathione-dependent formaldehyde-activating GFA; COGs: COG3791 conserved hypothetical protein; InterPro IPR006913; KEGG: mlo:mlr0219 hypothetical protein; PFAM: glutathione-dependent formaldehyde-activating GFA; SPTR: Glutathione-dependent formaldehyde-activating GFA; PFAM: Glutathione-dependent formaldehyde-activating enzyme. (122 aa) |
| | AEH89099.1 | Glutathione-dependent formaldehyde-activating GFA; COGs: COG3791 conserved hypothetical protein; InterPro IPR006913; KEGG: bid:Bind_2367 glutathione-dependent formaldehyde-activating GFA; PFAM: glutathione-dependent formaldehyde-activating GFA; SPTR: Glutathione-dependent formaldehyde-activating GFA; PFAM: Glutathione-dependent formaldehyde-activating enzyme. (140 aa) |
| | AEH89173.1 | Glutathione-dependent formaldehyde-activating GFA; COGs: COG3791 conserved hypothetical protein; InterPro IPR006913; KEGG: mlo:mlr0112 hypothetical protein; PFAM: glutathione-dependent formaldehyde-activating GFA; SPTR: Glutathione-dependent formaldehyde-activating GFA; PFAM: Glutathione-dependent formaldehyde-activating enzyme. (132 aa) |
| | rpsD | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (205 aa) |
| | AEH89246.1 | Glutathione-dependent formaldehyde-activating GFA; COGs: COG3791 conserved hypothetical protein; InterPro IPR006913; KEGG: mlo:mll0025 hypothetical protein; PFAM: glutathione-dependent formaldehyde-activating GFA; SPTR: Glutathione-dependent formaldehyde-activating GFA; PFAM: Glutathione-dependent formaldehyde-activating enzyme. (165 aa) |
| | rplM | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (154 aa) |
| | rpsI | COGs: COG0103 Ribosomal protein S9; InterPro IPR000754:IPR017441:IPR020574; KEGG: mlo:mll8456 30S ribosomal protein S9; PFAM: ribosomal protein S9; SPTR: 30S ribosomal protein S9; PFAM: Ribosomal protein S9/S16; Belongs to the universal ribosomal protein uS9 family. (160 aa) |
| | parC | DNA topoisomerase IV, A subunit; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily. (750 aa) |
| | AEH89492.1 | Transcriptional regulator, TetR family; InterPro IPR001647; KEGG: bja:blr4006 transcriptional regulatory protein; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family. (195 aa) |
| | AEH87834.1 | ADP-ribosylation/Crystallin J1; COGs: COG1397 ADP-ribosylglycohydrolase; InterPro IPR005502; KEGG: mlo:mll1744 hypothetical protein; PFAM: ADP-ribosylation/Crystallin J1; SPTR: ADP-ribosylation/Crystallin J1; PFAM: ADP-ribosylglycohydrolase. (349 aa) |
| | AEH87800.1 | Glutathione-dependent formaldehyde-activating GFA; COGs: COG3791 conserved hypothetical protein; InterPro IPR006913; KEGG: mlo:mlr1783 hypothetical protein; PFAM: glutathione-dependent formaldehyde-activating GFA; SPTR: Glutathione-dependent formaldehyde-activating GFA; PFAM: Glutathione-dependent formaldehyde-activating enzyme. (147 aa) |
| | AEH87718.1 | Transcriptional regulator, TetR family; InterPro IPR001647; KEGG: mlo:mll1924 transcription regulator; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family. (207 aa) |
| | AEH87611.1 | Transcriptional regulator, TetR family; InterPro IPR001647; KEGG: mlo:mlr2120 transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family. (195 aa) |
| | AEH87445.1 | COGs: COG4909 Propanediol dehydratase large subunit; InterPro IPR003206:IPR003208; KEGG: mlo:mll6722 glycerol dehydratase large subunit; PFAM: dehydratase large subunit; dehydratase medium subunit; PRIAM: Glycerol dehydratase; SPTR: Glycerol dehydratase; PFAM: Dehydratase large subunit; Dehydratase medium subunit. (756 aa) |
| | AEH87444.1 | COGs: COG4910 Propanediol dehydratase small subunit; InterPro IPR003207; KEGG: mlo:mll6721 glycerol dehydratase small subunit; PFAM: dehydratase small subunit; SPTR: Dehydratase small subunit; PFAM: Dehydratase small subunit. (139 aa) |
| | AEH87088.1 | Glutathione-dependent formaldehyde-activating GFA; COGs: COG3791 conserved hypothetical protein; InterPro IPR006913; KEGG: mlo:mll5054 hypothetical protein; PFAM: glutathione-dependent formaldehyde-activating GFA; SPTR: Glutathione-dependent formaldehyde-activating GFA; PFAM: Glutathione-dependent formaldehyde-activating enzyme. (145 aa) |
| | AEH86948.1 | Transcriptional regulator, TetR family; InterPro IPR001647; KEGG: mlo:mlr2419 transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family. (197 aa) |
| | AEH86945.1 | InterPro IPR001647; KEGG: ret:RHE_CH00526 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family. (193 aa) |
| | AEH86931.1 | Transcriptional regulator, TetR family; InterPro IPR001647; KEGG: mlo:mll2454 transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family. (213 aa) |
| | dnaG | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (648 aa) |
| | AEH86918.1 | COGs: COG0305 Replicative DNA helicase; KEGG: rle:RL3138 replicative DNA helicase; SPTR: Replicative DNA helicase; PFAM: DnaB-like helicase C terminal domain. (234 aa) |
| | rplY | Ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. (212 aa) |
| | clpS | ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. (101 aa) |
| | AEH86634.1 | Protein of unknown function DUF159; COGs: COG2135 conserved hypothetical protein; InterPro IPR003738; KEGG: mlo:mll7390 hypothetical protein; PFAM: protein of unknown function DUF159; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised ACR, COG2135; Belongs to the SOS response-associated peptidase family. (237 aa) |
| | AEH86570.1 | Biotin/lipoyl attachment domain-containing protein; COGs: COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein; InterPro IPR000089:IPR001451:IPR003016; KEGG: gsu:GSU3020 hexapeptide transferase family protein; PFAM: biotin/lipoyl attachment domain-containing protein; transferase hexapeptide repeat containing protein; SPTR: Biotin/lipoyl attachment domain-containing protein; PFAM: Biotin-requiring enzyme; TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family. (366 aa) |
| | AEH86523.1 | COGs: COG3569 Topoisomerase IB; InterPro IPR001631; KEGG: mlo:mll2873 hypothetical protein; PRIAM: DNA topoisomerase; SPTR: Topoisomerase IB-like protein; PFAM: Eukaryotic DNA topoisomerase I, catalytic core. (363 aa) |
| | AEH86508.1 | Transcriptional regulator, TetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: mlo:mlr2892 transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family. (217 aa) |
| | AEH86424.1 | NADH dehydogenase-like protein; COGs: COG3743 conserved hypothetical protein; KEGG: mlo:mlr3004 NADH dehydogenase-like protein; SPTR: NADH dehydogenase-like protein. (248 aa) |
| | AEH86347.1 | Transcriptional regulator, TetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: mlo:mlr3102 transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family. (214 aa) |
| | rpsU | Ribosomal protein S21; InterPro IPR001911:IPR018278; KEGG: mlo:msr3117 30S ribosomal protein S21; PFAM: ribosomal protein S21; SPTR: 30S ribosomal protein S21; TIGRFAM: ribosomal protein S21; PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. (88 aa) |
| | hpf | Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. (194 aa) |
| | ihfB | Integration host factor, beta subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. (94 aa) |
| | AEH86261.1 | ADP-ribosylation/Crystallin J1; InterPro IPR005502; KEGG: mes:Meso_1097 hypothetical protein; PFAM: ADP-ribosylation/Crystallin J1; SPTR: ADP-ribosylation/Crystallin J1; PFAM: ADP-ribosylglycohydrolase. (702 aa) |
| | AEH86183.1 | Glutathione-dependent formaldehyde-activating GFA; COGs: COG3791 conserved hypothetical protein; InterPro IPR006913; KEGG: mlo:msr3371 hypothetical protein; PFAM: glutathione-dependent formaldehyde-activating GFA; SPTR: Glutathione-dependent formaldehyde-activating GFA; PFAM: Glutathione-dependent formaldehyde-activating enzyme. (115 aa) |
| | AEH86124.1 | InterPro IPR001647; KEGG: mlo:mlr3465 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family. (199 aa) |
| | AEH86109.1 | ATP/cobalamin adenosyltransferase; COGs: COG2096 conserved hypothetical protein; InterPro IPR017858:IPR002779; KEGG: mlo:mlr3485 hypothetical protein; PFAM: cobalamin adenosyltransferase; PRIAM: Cob(I)yrinic acid a,c-diamide adenosyltransferase; SPTR: ATP/cobalamin adenosyltransferase; TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: Cobalamin adenosyltransferase; TIGRFAM: ATP:cob(I)alamin adenosyltransferase. (193 aa) |
| | rpmB | COGs: COG0227 Ribosomal protein L28; InterPro IPR001383; KEGG: mlo:mlr3552 50S ribosomal protein L28; PFAM: ribosomal protein L28; SPTR: Ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. (98 aa) |
| | AEH85973.1 | Transcriptional regulator, TetR family; InterPro IPR001647; KEGG: mlo:mll3646 hypothetical protein; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family. (177 aa) |
| | AEH85955.1 | Transcriptional regulator, TetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: mlo:mll3671 transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family. (235 aa) |
| | rpmF | COGs: COG0333 Ribosomal protein L32; InterPro IPR002677; KEGG: mlo:msl3782 50S ribosomal protein L32; PFAM: ribosomal L32p protein; SPTR: Ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. (60 aa) |
| | rpmJ | 50S ribosomal protein L36; InterPro IPR000473; KEGG: mlo:msr3814 50S ribosomal protein L36; SPTR: 50S ribosomal protein L36; PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type; Belongs to the bacterial ribosomal protein bL36 family. (41 aa) |
| | rpmE | Ribosomal protein L31; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily. (73 aa) |
| | AEH85774.1 | InterPro IPR001647; KEGG: mlo:mll3939 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family. (213 aa) |
| | rpmA | COGs: COG0211 Ribosomal protein L27; InterPro IPR001684:IPR018261; KEGG: mlo:msl4017 50S ribosomal protein L27; PFAM: ribosomal protein L27; SPTR: Ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. (89 aa) |
| | rplU | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (230 aa) |
| | AEH85711.1 | COGs: COG0514 Superfamily II DNA helicase; InterProIPR006293:IPR018329:IPR002121:IPR014021:IPR 001650:IPR011545:IPR018982:IPR014001; KEGG: mlo:mll4050 DNA helicase RecQ; PFAM: RQC domain; DEAD/DEAH box helicase domain protein; helicase domain protein; HRDC domain protein; SMART: DEAD-like helicase; helicase domain protein; HRDC domain protein; SPTR: ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; PFAM: Helicase conserved C-terminal domain; RQC domain; HRDC domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA heli [...] (604 aa) |
| | priA | Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (727 aa) |
| | AEH85652.1 | Transcriptional regulator, TetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: mlo:mlr4117 transcriptional regulatory protein; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family. (205 aa) |
| | rplS | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. (183 aa) |
| | rimM | 16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. (199 aa) |
| | rpsP | COGs: COG0228 Ribosomal protein S16; InterPro IPR000307; KEGG: mlo:mlr4381 30S ribosomal protein S16; PFAM: ribosomal protein S16; SPTR: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. (133 aa) |
| | AEH85398.1 | parB-like partition protein; COGs: COG1475 transcriptional regulator protein; InterPro IPR004437:IPR003115; KEGG: mlo:mll4477 chromosome partitioning protein, ParB; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; SPTR: ParB-like partition protein; TIGRFAM: parB-like partition protein; PFAM: ParB-like nuclease domain; KorB domain; TIGRFAM: ParB-like partition proteins; Belongs to the ParB family. (295 aa) |
| | AEH85318.1 | Transcriptional regulator, TetR family; InterPro IPR001647:IPR015292; KEGG: mlo:mlr4593 transcriptional regulator; PFAM: Transcriptional regulator TetR; regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Domain of unknown function (DUF1956); Bacterial regulatory proteins, tetR family. (228 aa) |
| | rpmH | Ribosomal protein L34; InterPro IPR000271; KEGG: mlo:msr4809 50S ribosomal protein L34; PFAM: ribosomal protein L34; SPTR: 50S ribosomal protein L34; TIGRFAM: ribosomal protein L34; manually curated; PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; Belongs to the bacterial ribosomal protein bL34 family. (44 aa) |
| | AEH89524.1 | Transcriptional regulator, TetR family; InterPro IPR001647:IPR001986; KEGG: mlo:mll8203 transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family. (201 aa) |
| | AEH89015.1 | AAA ATPase central domain protein; COGs: COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase; InterPro IPR003593:IPR003959; KEGG: mlo:mlr0329 recombination factor protein RarA; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; SPTR: AAA ATPase central domain protein; PFAM: MgsA AAA+ ATPase C terminal; ATPase family associated with various cellular activities (AAA). (435 aa) |
| | rplQ | COGs: COG0203 Ribosomal protein L17; InterPro IPR000456; KEGG: mlo:mlr0326 50S ribosomal protein L17; PFAM: ribosomal protein L17; SPTR: 50S ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17. (143 aa) |
| | AEH87924.1 | Transcriptional regulator, TetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647:IPR013573; KEGG: mlo:mlr1634 transcriptional regulator; PFAM: Tetracycline transcriptional regulator YcdC domain protein; regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family; YcdC-like protein, C-terminal region. (211 aa) |
| | rpsK | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (129 aa) |
| | rpsM | 30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. (122 aa) |
| | rplO | Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (157 aa) |
| | rpmD | COGs: COG1841 Ribosomal protein L30/L7E; InterPro IPR000517:IPR005996; KEGG: mlo:msr0316 50S ribosomal protein L30; PFAM: ribosomal protein L30; SPTR: Ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle. (65 aa) |
| | rpsE | Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. (187 aa) |
| | rplR | Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (119 aa) |
| | rplF | Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (177 aa) |
| | rpsH | Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (132 aa) |
