STRINGSTRING
AKN29759.1 AKN29759.1 AKN30126.1 AKN30126.1 AKN30127.1 AKN30127.1 carB carB carA carA AKN31691.1 AKN31691.1 AKN31692.1 AKN31692.1 AKN31694.1 AKN31694.1 AKN31695.1 AKN31695.1 AKN31779.1 AKN31779.1 AKN32221.1 AKN32221.1 AKN32222.1 AKN32222.1 AKN32224.1 AKN32224.1 AKN32500.1 AKN32500.1 AKN32689.1 AKN32689.1 carA-2 carA-2 pyrE pyrE pyrD pyrD pyrK pyrK pyrF pyrF pyrC pyrC AKN32696.1 AKN32696.1 pyrB pyrB AKN32746.1 AKN32746.1 AKN32747.1 AKN32747.1 AKN32748.1 AKN32748.1 AKN33208.1 AKN33208.1 AKN33670.1 AKN33670.1 AKN33671.1 AKN33671.1 AKN33672.1 AKN33672.1 AKN33679.1 AKN33679.1 AKN33680.1 AKN33680.1 pyrR pyrR AKN34001.1 AKN34001.1 AKN34073.1 AKN34073.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AKN29759.1Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (360 aa)
AKN30126.1NAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (297 aa)
AKN30127.1Dihydropyrimidine dehydrogenase; NADH-dependent; catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation; Derived by automated computational analysis using gene prediction method: Protein Homology. (462 aa)
carBCarbamoyl phosphate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CarB family. (1068 aa)
carACarbamoyl phosphate synthase small subunit; Catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; Derived by automated computational analysis using gene prediction method: Protein Homology. (349 aa)
AKN31691.1Allantoate amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (415 aa)
AKN31692.1Phenylhydantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (461 aa)
AKN31694.1Dihydropyrimidine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (412 aa)
AKN31695.1Dihydropyrimidine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (421 aa)
AKN31779.1Carbamate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (319 aa)
AKN32221.1Dihydropyrimidine dehydrogenase; NADH-dependent; catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation; Derived by automated computational analysis using gene prediction method: Protein Homology. (460 aa)
AKN32222.1NAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (297 aa)
AKN32224.1Carbamate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbamate kinase family. (314 aa)
AKN32500.1Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1499 aa)
AKN32689.1Carbamoyl phosphate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (1062 aa)
carA-2Carbamoyl phosphate synthase small subunit; Catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; Derived by automated computational analysis using gene prediction method: Protein Homology. (353 aa)
pyrEOrotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). (193 aa)
pyrDDiguanylate cyclase; Catalyzes the conversion of dihydroorotate to orotate. (297 aa)
pyrKDiguanylate cyclase; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+). (246 aa)
pyrFOrotidine 5'-phosphate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the OMP decarboxylase family. Type 2 subfamily. (290 aa)
pyrCDihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. (394 aa)
AKN32696.1Aspartate carbamoyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (143 aa)
pyrBAspartate carbamoyltransferase catalytic subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. (306 aa)
AKN32746.1NAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (296 aa)
AKN32747.1Dihydropyrimidine dehydrogenase; NADH-dependent; catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation; Derived by automated computational analysis using gene prediction method: Protein Homology. (462 aa)
AKN32748.1NAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (296 aa)
AKN33208.1Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. (332 aa)
AKN33670.1Phenylhydantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (466 aa)
AKN33671.1Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (514 aa)
AKN33672.1Allantoate amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (415 aa)
AKN33679.1Dihydropyrimidine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (421 aa)
AKN33680.1Dihydropyrimidine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (412 aa)
pyrRBifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily. (177 aa)
AKN34001.1Uracil permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (445 aa)
AKN34073.1NAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
Your Current Organism:
Clostridium carboxidivorans
NCBI taxonomy Id: 536227
Other names: C. carboxidivorans P7, Clostridium carboxidivorans P7, Clostridium carboxidivorans str. P7, Clostridium carboxidivorans strain P7
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