(19 nodes) Glutamate biosynthetic process, and Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B network (Clostridium carboxidivorans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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Known Interactions

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experimentally determined

Predicted Interactions

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protein homology

Your Input:
	AKN29759.1	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (360 aa)
	AKN30126.1	NAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (297 aa)
	AKN30127.1	Dihydropyrimidine dehydrogenase; NADH-dependent; catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation; Derived by automated computational analysis using gene prediction method: Protein Homology. (462 aa)
	AKN31691.1	Allantoate amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (415 aa)
	AKN31692.1	Phenylhydantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (461 aa)
	AKN31694.1	Dihydropyrimidine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (412 aa)
	AKN31695.1	Dihydropyrimidine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (421 aa)
	AKN32221.1	Dihydropyrimidine dehydrogenase; NADH-dependent; catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation; Derived by automated computational analysis using gene prediction method: Protein Homology. (460 aa)
	AKN32222.1	NAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (297 aa)
	AKN32500.1	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1499 aa)
	AKN32746.1	NAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (296 aa)
	AKN32747.1	Dihydropyrimidine dehydrogenase; NADH-dependent; catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation; Derived by automated computational analysis using gene prediction method: Protein Homology. (462 aa)
	AKN32748.1	NAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (296 aa)
	AKN33670.1	Phenylhydantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (466 aa)
	AKN33671.1	Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (514 aa)
	AKN33672.1	Allantoate amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (415 aa)
	AKN33679.1	Dihydropyrimidine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (421 aa)
	AKN33680.1	Dihydropyrimidine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (412 aa)
	AKN34073.1	NAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)

Your Current Organism:

Clostridium carboxidivorans

NCBI taxonomy Id: 536227
Other names: C. carboxidivorans P7, Clostridium carboxidivorans P7, Clostridium carboxidivorans str. P7, Clostridium carboxidivorans strain P7

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKN29759.1	AKN30126.1	Ccar_02405	Ccar_04520	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	NAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.740
AKN29759.1	AKN31691.1	Ccar_02405	Ccar_12805	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Allantoate amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.861
AKN29759.1	AKN31692.1	Ccar_02405	Ccar_12810	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phenylhydantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.979
AKN29759.1	AKN31694.1	Ccar_02405	Ccar_12820	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dihydropyrimidine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.924
AKN29759.1	AKN31695.1	Ccar_02405	Ccar_12825	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dihydropyrimidine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.950
AKN29759.1	AKN32222.1	Ccar_02405	Ccar_15680	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	NAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.740
AKN29759.1	AKN32746.1	Ccar_02405	Ccar_18635	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	NAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.738
AKN29759.1	AKN32748.1	Ccar_02405	Ccar_18645	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	NAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.739
AKN29759.1	AKN33670.1	Ccar_02405	Ccar_23745	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phenylhydantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.980
AKN29759.1	AKN33672.1	Ccar_02405	Ccar_23755	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Allantoate amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.862
AKN29759.1	AKN33679.1	Ccar_02405	Ccar_23790	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dihydropyrimidine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.951
AKN29759.1	AKN33680.1	Ccar_02405	Ccar_23795	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dihydropyrimidine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.925
AKN29759.1	AKN34073.1	Ccar_02405	Ccar_25845	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	NAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.744
AKN30126.1	AKN29759.1	Ccar_04520	Ccar_02405	NAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.740
AKN30126.1	AKN30127.1	Ccar_04520	Ccar_04525	NAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dihydropyrimidine dehydrogenase; NADH-dependent; catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.985
AKN30126.1	AKN31692.1	Ccar_04520	Ccar_12810	NAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phenylhydantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.436
AKN30126.1	AKN31694.1	Ccar_04520	Ccar_12820	NAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dihydropyrimidine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.713
AKN30126.1	AKN31695.1	Ccar_04520	Ccar_12825	NAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dihydropyrimidine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.724
AKN30126.1	AKN32221.1	Ccar_04520	Ccar_15675	NAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dihydropyrimidine dehydrogenase; NADH-dependent; catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.954
AKN30126.1	AKN32747.1	Ccar_04520	Ccar_18640	NAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dihydropyrimidine dehydrogenase; NADH-dependent; catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.962

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