STRINGSTRING
AKN29451.1 AKN29451.1 AKN29452.1 AKN29452.1 AKN29455.1 AKN29455.1 AKN33463.1 AKN33463.1 AKN33464.1 AKN33464.1 AKN33465.1 AKN33465.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AKN29451.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0102 family. (122 aa)
AKN29452.1Magnesium chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (505 aa)
AKN29455.1DNA processing protein DprA; Derived by automated computational analysis using gene prediction method: Protein Homology. (359 aa)
AKN33463.1Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (188 aa)
AKN33464.1Magnesium chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (512 aa)
AKN33465.1DNA processing protein DprA; Derived by automated computational analysis using gene prediction method: Protein Homology. (364 aa)
Your Current Organism:
Clostridium carboxidivorans
NCBI taxonomy Id: 536227
Other names: C. carboxidivorans P7, Clostridium carboxidivorans P7, Clostridium carboxidivorans str. P7, Clostridium carboxidivorans strain P7
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